// ==========================================================================
//                 SeqAn - The Library for Sequence Analysis
// ==========================================================================
// Copyright (c) 2006-2013, Knut Reinert, FU Berlin
// All rights reserved.
//
// Redistribution and use in source and binary forms, with or without
// modification, are permitted provided that the following conditions are met:
//
//     * Redistributions of source code must retain the above copyright
//       notice, this list of conditions and the following disclaimer.
//     * Redistributions in binary form must reproduce the above copyright
//       notice, this list of conditions and the following disclaimer in the
//       documentation and/or other materials provided with the distribution.
//     * Neither the name of Knut Reinert or the FU Berlin nor the names of
//       its contributors may be used to endorse or promote products derived
//       from this software without specific prior written permission.
//
// THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
// AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
// ARE DISCLAIMED. IN NO EVENT SHALL KNUT REINERT OR THE FU BERLIN BE LIABLE
// FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
// DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
// SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
// CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT
// LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY
// OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH
// DAMAGE.
//
// ==========================================================================
// Author: David Weese <david.weese@fu-berlin.de>
// ==========================================================================

#ifndef SEQAN_HEADER_INDEX_MANUAL_FORWARDS_H 
#define SEQAN_HEADER_INDEX_MANUAL_FORWARDS_H 

//SEQAN_NO_GENERATED_FORWARDS: no forwards are generated for this file

//////////////////////////////////////////////////////////////////////////////
// CLASSES
//////////////////////////////////////////////////////////////////////////////

namespace SEQAN_NAMESPACE_MAIN {

	struct FibreText_;		// Original text. Can be a String or a StringSet
	struct FibreRawText_;	// Concatenation of the strings above
	struct FibreSA_;		// suffix array (of raw text with virtual $-delimiters) with Pair entries
	struct FibreRawSA_;	// suffix array with integer entries
	struct FibreSae_;		// suffix array reordered in a b-tree
	struct FibreLcp_;		// lcp table of raw text
	struct FibreLcpe_;		// lcp interval tree
	struct FibreChildtab_;	// childtab (Kurtz et al.) of raw text
	struct FibreBwt_;		// burrows wheeler table of raw text

	typedef Tag<FibreText_> const		FibreText;
	typedef Tag<FibreRawText_> const	FibreRawText;
	typedef Tag<FibreSA_> const		FibreSA;
	typedef Tag<FibreRawSA_> const		FibreRawSA;
	typedef Tag<FibreSae_> const		FibreSae;
	typedef Tag<FibreLcp_> const		FibreLcp;
	typedef Tag<FibreLcpe_> const		FibreLcpe;
	typedef Tag<FibreChildtab_> const	FibreChildtab;
	typedef Tag<FibreBwt_> const		FibreBwt;

}

#endif

