AlignConfig

| Class AlignConfig The AlignConfig class encapsulates how DP is carried out. It indicates at what ends gaps are free, the so-called free ends-space alignments. AlignConfig<bool TTop, bool TLeft, bool TRight, bool TBottom, TSpec> Include Headers seqan/graph_align.h Parameters
TTop | If true then 0's in top row. Default: false
TLeft | If true then 0's in the left row. Default: false
TRight | If true then maximum is also searched in the last column. Default: false
TBottom | If true then maximum is also searched in the last row. Default: false
TSpec | The specializing type. Metafunctions: Spec Default: Default, see Default.
Functions
globalAlignment | Computes the best global alignment of the two sequences.
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