assignQual

| Function assignQual Extracts the quality values of a sequence file fragment. assignQual(qualities, seqFragment, formatTag) Include Headers seqan/file.h Parameters
qualities | The resulting quality values encoded in ASCII. Types: CharString Remarks: The quality values are encoded in ASCII and must be manually converted into zero-based values.
seqFragment | A sequence file fragment. Types: String
formatTag | A file format tag. Types: AutoSeqFormat, File Format
Remarks After calling split on a ConcatDirect StringSet to divide a file into fragments, this function can be used to extract the sequence quality values of every fragment in the StringSet. See Also split SeqAn - Sequence Analysis Library - www.seqan.de

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