PMode

| Class Specialization PMode Represents the P computation scheme for handling "zero" probabilities.
Pseudocount
PMode
Pseudocount<TValue, PMode> Include Headers seqan/find_motif.h Parameters
TValue | The type of sequence which is considered. Types: AminoAcid, Dna
Remarks The P mode computation scheme distributes the pseudocounts among the various residue according to their background probabilities. Specialization of Pseudocount Metafunctions
Value | Type of the items in the container. (Pseudocount)
Functions
convertSetOfPatternsToProfile | Converts a set of sequence patterns into a profile. (Pseudocount)
normalize | Determines the normalized frequencies. (Pseudocount)
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