Seed Extension

| Tag Seed Extension The algorithms used to extend a seed. Include Headers seqan/seeds.h Functions
extendSeed | Extends a seed.
extendSeed | Extends a seed.
extendSeed | Extends a seed.
extendSeeds | Extension of seeds.
extendSeeds | Extension of seeds.
extendSeeds | Extension of seeds.
extendSeedScore | Extends a seed and increases the score.
extendSeedScore | Extends a seed and increases the score.
extendSeedScore | Extends a seed and increases the score.
extendSeedsScore | Extension of seeds with score calculation.
extendSeedsScore | Extension of seeds with score calculation.
extendSeedsScore | Extension of seeds with score calculation.
Tags
MatchExtend | Extends a seed until a mismatch occurs.
UngappedXDrop | Ungapped extension of a seed until score drops below a Value.
GappedXDrop | Gapped extension of a seed until score drops below a Value. Only SimpleSeeds.
See Also extendSeedScore, extendSeedsScore, extendSeed, extendSeeds SeqAn - Sequence Analysis Library - www.seqan.de

Page built @2012/03/14 16:34:52