Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
Upstream-Name: QIIME
Upstream-Contact: Greg Caporaso <gregcaporaso@gmail.com>
Source: http://sourceforge.net/projects/qiime/files/releases/
Files-Excluded: 
    *.jar

Files: *
Copyright: 2010-2012 Greg Caporaso <gregcaporaso@gmail.com>,
                     Jens Reeder <jens.reeder@gmail.com>,
                     Kyle Bittinger and others
License: GPL-2+

License: GPL-2+
 This program is free software; you can redistribute it and/or modify
 it under the terms of the GNU General Public License as published by
 the Free Software Foundation; either version 2 of the License, or
 (at your option) any later version.
 .
 This program is distributed in the hope that it will be useful,
 but WITHOUT ANY WARRANTY; without even the implied warranty of
 MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 GNU General Public License for more details.
 .
 You should have received a copy of the GNU General Public License along
 with this program; if not, write to the Free Software Foundation, Inc.,
 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
 .
 For other licensing arrangements, please contact Daniel J. Schaid.
 .
 On a Debian system, the GNU GPL license version 2 is distributed in the file
 ./usr/share/common-licenses/GPL-2..

Files: qiime_test_data/align_seqs/core_set_aligned.fasta.imputed
       qiime_test_data/filter_alignment/lanemask_in_1s_and_0s
Copyright: (C) The Greengenes Database Consortium <http://greengenes.secondgenome.com/>
License: CC-BY-SA 
 The Greengenes Database by The Greengenes Database Consortium is licensed under
 a Creative Commons Attribution-ShareAlike 3.0 Unported License.
 .
 Academic users should cite:
   DeSantis, T. Z., P. Hugenholtz, N. Larsen, M. Rojas, E. L. Brodie, K. Keller,
   T. Huber, D. Dalevi, P. Hu, and G. L. Andersen. 2006.
   Greengenes, a Chimera-Checked 16S rRNA Gene Database and Workbench Compatible
   with ARB. Appl Environ Microbiol 72:5069-72.

Files: qiime/support_files/js/jquery.js
Copyright: John Resig <jquery.com>
License: GPL-2+ | MIT
Comment: Dual licensed under the MIT (MIT-LICENSE.txt)
 and GPL (GPL-LICENSE.txt) licenses.

Files: qiime/support_files/js/jquery.tablednd_0_5.js
Copyright: Denis Howlett <denish@isocra.com>
License: MIT

License: MIT
 Permission is hereby granted, free of charge, to any person obtaining a
 copy of this software and associated documentation files (the
 "Software"), to deal in the Software without restriction, including
 without limitation the rights to use, copy, modify, merge, publish,
 distribute, sublicense, and/or sell copies of the Software, and to
 permit persons to whom the Software is furnished to do so, subject to
 the following conditions:
 .
 The above copyright notice and this permission notice shall be included
 in all copies or substantial portions of the Software.
 .
 THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS
 OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
 MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT.
 IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY
 CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT,
 TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE
 SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE. 

Files: qiime/support_files/js/overlib.js
Copyright: 1998-2004 Erik Bosrup. All rights reserved.
 Contributors are listed on the homepage.
 This file might be old, always check for the latest version at:
   http://www.bosrup.com/web/overlib/
 .
 Please read the license agreement (available through the link above)
 before using overLIB. Direct any licensing questions to erik@bosrup.com.
 .
 Do not sell this as your own work or remove this copyright notice.
 For full details on copying or changing this script please read the
 license agreement at the link above. Please give credit on sites that
 use overLIB and submit changes of the script so other people can use
 them as well.
Comment: The link above throws 404

Files: debian/*
Copyright: 2010 Sri Girish Srinivasa Murthy <srigirish@evolbio.mpg.de>
                Steffen Moeller <moeller@debian.org>
           2011-2012 Tim Booth <tbooth@ceh.ac.uk>,
                Andreas Tille <tille@debian.org>
License: GPL-2+
 Same as software itself.

