Date: 2015-10-02T22:07:14+00:00

Actual source code: mpimattransposematmult.c
petsc-3.6.2 2015-10-02
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      2: /*
      3:   Defines matrix-matrix product routines for pairs of MPIAIJ matrices
      4:           C = A^T * B
      5:   The routines are slightly modified from MatTransposeMatMultxxx_SeqAIJ_SeqDense().
      6: */
      7: #include <../src/mat/impls/aij/seq/aij.h> /*I "petscmat.h" I*/
      8: #include <../src/mat/impls/aij/mpi/mpiaij.h>
      9: #include <../src/mat/impls/dense/mpi/mpidense.h>

     13: PetscErrorCode MatDestroy_MPIDense_MatTransMatMult(Mat A)
     14: {
     15:   PetscErrorCode      ierr;
     16:   Mat_MPIDense        *a = (Mat_MPIDense*)A->data;
     17:   Mat_MatTransMatMult *atb = a->atb;

     20:   MatDestroy(&atb->mA);
     21:   VecDestroy(&atb->bt);
     22:   VecDestroy(&atb->ct);
     23:   (atb->destroy)(A);
     24:   PetscFree(atb);
     25:   return(0);
     26: }

     30: PetscErrorCode MatTransposeMatMult_MPIAIJ_MPIDense(Mat A,Mat B,MatReuse scall,PetscReal fill,Mat *C)
     31: {

     35:   if (scall == MAT_INITIAL_MATRIX) {
     36:     PetscLogEventBegin(MAT_TransposeMatMultSymbolic,A,B,0,0);
     37:     MatTransposeMatMultSymbolic_MPIAIJ_MPIDense(A,B,fill,C);
     38:     PetscLogEventEnd(MAT_TransposeMatMultSymbolic,A,B,0,0);
     39:   }
     40:   PetscLogEventBegin(MAT_TransposeMatMultNumeric,A,B,0,0);
     41:   MatTransposeMatMultNumeric_MPIAIJ_MPIDense(A,B,*C);
     42:   PetscLogEventEnd(MAT_TransposeMatMultNumeric,A,B,0,0);
     43:   return(0);
     44: }

     48: PetscErrorCode MatTransposeMatMultSymbolic_MPIAIJ_MPIDense(Mat A,Mat B,PetscReal fill,Mat *C)
     49: {
     50:   PetscErrorCode      ierr;
     51:   PetscInt            m=A->rmap->n,n=A->cmap->n,BN=B->cmap->N;
     52:   Mat_MatTransMatMult *atb;
     53:   Mat                 Cdense;
     54:   Vec                 bt,ct;
     55:   Mat_MPIDense        *c;
     56:
     58:   PetscNew(&atb);

     60:   /* create output dense matrix C = A^T*B */
     61:   MatCreate(PetscObjectComm((PetscObject)A),&Cdense);
     62:   MatSetSizes(Cdense,n,PETSC_DECIDE,PETSC_DECIDE,BN);
     63:   MatSetType(Cdense,MATMPIDENSE);
     64:   MatMPIDenseSetPreallocation(Cdense,NULL);

     66:   /* create vectors bt and ct to hold locally transposed arrays of B and C */
     67:   VecCreate(PetscObjectComm((PetscObject)A),&bt);
     68:   VecSetSizes(bt,m*BN,PETSC_DECIDE);
     69:   VecSetType(bt,VECSTANDARD);
     70:   VecCreate(PetscObjectComm((PetscObject)A),&ct);
     71:   VecSetSizes(ct,n*BN,PETSC_DECIDE);
     72:   VecSetType(ct,VECSTANDARD);
     73:   atb->bt = bt;
     74:   atb->ct = ct;

     76:   *C = Cdense;
     77:   c                    = (Mat_MPIDense*)Cdense->data;
     78:   c->atb               = atb;
     79:   atb->destroy         = Cdense->ops->destroy;
     80:   Cdense->ops->destroy = MatDestroy_MPIDense_MatTransMatMult;
     81:   return(0);
     82: }

     86: PetscErrorCode MatTransposeMatMultNumeric_MPIAIJ_MPIDense(Mat A,Mat B,Mat C)
     87: {
     88:   PetscErrorCode      ierr;
     89:   PetscInt            i,j,k,m=A->rmap->n,n=A->cmap->n,BN=B->cmap->N;
     90:   PetscScalar         *Barray,*Carray,*btarray,*ctarray;
     91:   Mat_MPIDense        *c=(Mat_MPIDense*)C->data;
     92:   Mat_MatTransMatMult *atb=c->atb;
     93:   Vec                 bt=atb->bt,ct=atb->ct;

     96:   /* create MAIJ matrix mA from A -- should be done in symbolic phase */
     97:   MatDestroy(&atb->mA);
     98:   MatCreateMAIJ(A,BN,&atb->mA);

    100:   /* transpose local arry of B, then copy it to vector bt */
    101:   MatDenseGetArray(B,&Barray);
    102:   VecGetArray(bt,&btarray);

    104:   k=0;
    105:   for (j=0; j<BN; j++) {
    106:     for (i=0; i<m; i++) btarray[i*BN + j] = Barray[k++];
    107:   }
    108:   VecRestoreArray(bt,&btarray);
    109:   MatDenseRestoreArray(B,&Barray);

    111:   /* compute ct = mA^T * cb */
    112:   MatMultTranspose(atb->mA,bt,ct);

    114:   /* transpose local arry of ct to matrix C */
    115:   MatDenseGetArray(C,&Carray);
    116:   VecGetArray(ct,&ctarray);
    117:   k = 0;
    118:   for (j=0; j<BN; j++) {
    119:     for (i=0; i<n; i++) Carray[k++] = ctarray[i*BN + j];
    120:   }
    121:   VecRestoreArray(ct,&ctarray);
    122:   MatDenseRestoreArray(C,&Carray);
    123:   MatAssemblyBegin(C,MAT_FINAL_ASSEMBLY);
    124:   MatAssemblyEnd(C,MAT_FINAL_ASSEMBLY);
    125:   return(0);
    126: }