Date: 2015-10-02T22:13:10+00:00

Actual source code: daindex.c
petsc-3.6.2 2015-10-02
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      2: /*
      3:   Code for manipulating distributed regular arrays in parallel.
      4: */

      6: #include <petsc/private/dmdaimpl.h>    /*I   "petscdmda.h"   I*/

     10: /*
     11:    Gets the natural number for each global number on the process.

     13:    Used by DMDAGetAO() and DMDAGlobalToNatural_Create()
     14: */
     15: PetscErrorCode DMDAGetNatural_Private(DM da,PetscInt *outNlocal,IS *isnatural)
     16: {
     18:   PetscInt       Nlocal,i,j,k,*lidx,lict = 0,dim = da->dim;
     19:   DM_DA          *dd = (DM_DA*)da->data;

     22:   Nlocal = (dd->xe-dd->xs);
     23:   if (dim > 1) Nlocal *= (dd->ye-dd->ys);
     24:   if (dim > 2) Nlocal *= (dd->ze-dd->zs);

     26:   PetscMalloc1(Nlocal,&lidx);

     28:   if (dim == 1) {
     29:     for (i=dd->xs; i<dd->xe; i++) {
     30:       /*  global number in natural ordering */
     31:       lidx[lict++] = i;
     32:     }
     33:   } else if (dim == 2) {
     34:     for (j=dd->ys; j<dd->ye; j++) {
     35:       for (i=dd->xs; i<dd->xe; i++) {
     36:         /*  global number in natural ordering */
     37:         lidx[lict++] = i + j*dd->M*dd->w;
     38:       }
     39:     }
     40:   } else if (dim == 3) {
     41:     for (k=dd->zs; k<dd->ze; k++) {
     42:       for (j=dd->ys; j<dd->ye; j++) {
     43:         for (i=dd->xs; i<dd->xe; i++) {
     44:           lidx[lict++] = i + j*dd->M*dd->w + k*dd->M*dd->N*dd->w;
     45:         }
     46:       }
     47:     }
     48:   }
     49:   *outNlocal = Nlocal;
     50:   ISCreateGeneral(PetscObjectComm((PetscObject)da),Nlocal,lidx,PETSC_OWN_POINTER,isnatural);
     51:   return(0);
     52: }

     56: /*@
     57:    DMDASetAOType - Sets the type of application ordering for a distributed array.

     59:    Collective on DMDA

     61:    Input Parameter:
     62: .  da - the distributed array
     63: .  aotype - type of AO

     65:    Output Parameters:

     67:    Level: intermediate

     69:    Notes:
     70:    It will generate and error if an AO has already been obtained with a call to DMDAGetAO and the user sets a different AOType

     72: .keywords: distributed array, get, global, indices, local-to-global

     74: .seealso: DMDACreate2d(), DMDAGetAO(), DMDAGetGhostCorners(), DMDAGetCorners(), DMDALocalToGlocal()
     75:           DMGlobalToLocalBegin(), DMGlobalToLocalEnd(), DMLocalToLocalBegin(), DMLocalToLocalEnd(), DMDAGetGlobalIndices(), DMDAGetOwnershipRanges(),
     76:           AO, AOPetscToApplication(), AOApplicationToPetsc()
     77: @*/
     78: PetscErrorCode  DMDASetAOType(DM da,AOType aotype)
     79: {
     80:   DM_DA          *dd;
     81:   PetscBool      isdmda;

     86:   PetscObjectTypeCompare((PetscObject)da,DMDA,&isdmda);
     87:   if (!isdmda) SETERRQ(PetscObjectComm((PetscObject)da),PETSC_ERR_SUP,"Requires a DMDA as input");
     88:   /* now we can safely dereference */
     89:   dd = (DM_DA*)da->data;
     90:   if (dd->ao) { /* check if the already computed AO has the same type as requested */
     91:     PetscBool match;
     92:     PetscObjectTypeCompare((PetscObject)dd->ao,aotype,&match);
     93:     if (!match) SETERRQ(PetscObjectComm((PetscObject)da),PETSC_ERR_SUP,"Cannot change AO type");
     94:     return(0);
     95:   }
     96:   PetscFree(dd->aotype);
     97:   PetscStrallocpy(aotype,(char**)&dd->aotype);
     98:   return(0);
     99: }

    103: /*@
    104:    DMDAGetAO - Gets the application ordering context for a distributed array.

    106:    Collective on DMDA

    108:    Input Parameter:
    109: .  da - the distributed array

    111:    Output Parameters:
    112: .  ao - the application ordering context for DMDAs

    114:    Level: intermediate

    116:    Notes:
    117:    In this case, the AO maps to the natural grid ordering that would be used
    118:    for the DMDA if only 1 processor were employed (ordering most rapidly in the
    119:    x-direction, then y, then z).  Multiple degrees of freedom are numbered
    120:    for each node (rather than 1 component for the whole grid, then the next
    121:    component, etc.)

    123: .keywords: distributed array, get, global, indices, local-to-global

    125: .seealso: DMDACreate2d(), DMDASetAOType(), DMDAGetGhostCorners(), DMDAGetCorners(), DMDALocalToGlocal()
    126:           DMGlobalToLocalBegin(), DMGlobalToLocalEnd(), DMLocalToLocalBegin(), DMLocalToLocalEnd(),  DMDAGetOwnershipRanges(),
    127:           AO, AOPetscToApplication(), AOApplicationToPetsc()
    128: @*/
    129: PetscErrorCode  DMDAGetAO(DM da,AO *ao)
    130: {
    131:   DM_DA          *dd;
    132:   PetscBool      isdmda;

    138:   PetscObjectTypeCompare((PetscObject)da,DMDA,&isdmda);
    139:   if (!isdmda) SETERRQ(PetscObjectComm((PetscObject)da),PETSC_ERR_SUP,"Requires a DMDA as input");
    140:   /* now we can safely dereference */
    141:   dd = (DM_DA*)da->data;

    143:   /*
    144:      Build the natural ordering to PETSc ordering mappings.
    145:   */
    146:   if (!dd->ao) {
    147:     IS             ispetsc,isnatural;
    149:     PetscInt       Nlocal;

    151:     DMDAGetNatural_Private(da,&Nlocal,&isnatural);
    152:     ISCreateStride(PetscObjectComm((PetscObject)da),Nlocal,dd->base,1,&ispetsc);
    153:     AOCreate(PetscObjectComm((PetscObject)da),&dd->ao);
    154:     AOSetIS(dd->ao,isnatural,ispetsc);
    155:     AOSetType(dd->ao,dd->aotype);
    156:     PetscLogObjectParent((PetscObject)da,(PetscObject)dd->ao);
    157:     ISDestroy(&ispetsc);
    158:     ISDestroy(&isnatural);
    159:   }
    160:   *ao = dd->ao;
    161:   return(0);
    162: }