#NEXUS
BEGIN TAXA;
    TITLE Untitled_TAXA_Block_1;
    DIMENSIONS NTax = 6;
    TAXLABELS P._fimbriata P._robusta P._americana P._myriophylla P._polygama P._macrophylla;
    blockid bogus;
END;
BEGIN CHARACTERS;
    TITLE dna_forty_five;
    LINK TAXA = Untitled_TAXA_Block_1;
    DIMENSIONS NChar=45;
    FORMAT Datatype=DNA  Gap=- Equate=" Q=(AC)";
Matrix
P._fimbriata       RCCTCGGCTTAACGAACCTCGGCTTAACGAACCTCGGCTTAACGA
P._robusta         QCCTCGGCTTAACCAACCTCGGCTTAACGAACCTCGGCTTAACGA
P._americana       QCGTCGCTTTCA---ACGTCGCTTTCACCAACGTCGCTTTCACCA
P._myriophylla     ACGTCGCTTTCA---ACGTCGCTTTCACCAACGTC?CTTTCACCA
P._polygama        ACGTCGCTCTCACCAACGTCGCTTTCACCAACGTC?CTTTCACCA
P._macrophylla     ACGTCGCTCTCACCAACGTCGCTTTCACCAACGTCGCTTTCACCA
;
END;
BEGIN CHARACTERS;
    TITLE rna_forty_five;
    LINK TAXA = Untitled_TAXA_Block_1;
    DIMENSIONS NChar=45;
    FORMAT Datatype=RNA  Gap=-;
Matrix
P._fimbriata       YR?UCGGCUUAACGAACCUCGGCUUAACGAACCUCGGCUUAACGA
P._robusta         NC?UCGGCUUAACCAACCUCGGCUUAACGAACCUCGGCUUAACGA
P._americana       ACGUCGCUUUCA---ACGUCGCUUUCACCAACGUCGCUUUCACCA
P._myriophylla     ACGUCGCUUUCA---ACGUCGCUUUCACCAACGUC?CUUUCACCA
P._polygama        ACGUCGCUCUCACCAACGUCGCUUUCACCAACGUC?CUUUCACCA
P._macrophylla     ACGUCGCUCUCACCAACGUCGCUUUCACCAACGUCGCUUUCACCA
;
END;
BEGIN CHARACTERS;
    TITLE Untitled_CHARACTERS_Block_1;
    LINK TAXA = Untitled_TAXA_Block_1;
    DIMENSIONS NChar=3;
    FORMAT Datatype=Standard Symbols="01" Tokens;
    CharStateLabels 
      1 leaf_margins /  entire fimbriate,
      2 flower_color /  white_to_cream crimson,
      3 breeding_system /  hermaphroditic gynomonoecious gynodioecious dioecious;
Matrix
P._fimbriata        fimbriate crimson gynomonoecious
P._robusta          fimbriate crimson gynomonoecious
P._americana        entire white_to_cream hermaphroditic
P._myriophylla      entire white_to_cream hermaphroditic
P._polygama         entire white_to_cream dioecious
P._macrophylla      entire crimson gynodioecious
;
END;
BEGIN CHARACTERS;
    TITLE Untitled_CHARACTERS_Block_2;
    LINK TAXA = Untitled_TAXA_Block_1;
    DIMENSIONS NChar=3;
    FORMAT Datatype=Standard Symbols="0123";
    CharStateLabels 
      1 leaf_margins /  entire fimbriate,
      2 flower_color /  white_to_cream crimson,
      3 breeding_system /  hermaphroditic gynomonoecious gynodioecious dioecious;
Matrix
P._fimbriata       111
P._robusta         111
P._americana       000
P._myriophylla     000
P._polygama        003
P._macrophylla     012
;
END;
BEGIN CHARACTERS;
    TITLE Untitled_CHARACTERS_Block_3;
    LINK TAXA = Untitled_TAXA_Block_1;
    DIMENSIONS NTax=4 NChar=15;
    FORMAT Datatype=DNA;
Matrix
P._fimbriata       ACCTCGGCTTAACGA
P._robusta         ACCTCGGCTTAACCA
P._americana       ACGTCGCTCTCACCA
P._myriophylla     ACGTCGCTTTCACCA
;
END;
BEGIN CHARACTERS;
    TITLE Untitled_CHARACTERS_Block_4;
    LINK TAXA = Untitled_TAXA_Block_1;
    DIMENSIONS NChar=15;
    FORMAT Datatype=DNA;
    CHARLABELS site_1 site_2 site_3 site_4 site_5 site_6 site_7 site_8 site_9 site_10 site_11 site_12 site_13 site_14 site_15;
Matrix
P._fimbriata       ACCTCGGCTTAACGA
P._robusta         ACCTCGGCTTAACCA
P._americana       ACGTCGCTCTCACCA
P._myriophylla     ACGTCGCTTTCACCA
P._polygama        ACCTCGCTTTCACGA
P._macrophylla     ACCTCGCTTTCACGA
;
END;
