
## METRICS CLASS	org.broadinstitute.dropseqrna.metrics.ReadQualityMetrics
aggregate	totalReads	mappedReads	hqMappedReads	hqMappedReadsNoPCRDupes
TCGCCTTACGCG	2	2	1	1
TACAAATAAGGC	9	9	7	7
AGGGAAATTGAG	1	1	0	0
AGGGAAAATTGA	1046	1046	857	857
AGGGAAAATTGC	4	4	4	4
TAAAATTAAGGC	1	1	1	1
TGGCGAAGAGAA	1	1	1	1
TACAATTAGGCC	3	3	3	3
AGGGAAATTGAC	1	1	1	1
TGGTGAAGAGAT	1	1	1	1
TTGCCTTACGCA	9	9	6	6
AACAGGGACAGA	12	12	10	10
TTGCCTTACGCC	2	2	1	1
TTGCCTTACCCG	12	12	3	3
all	6370	6370	4893	4893
ATCAGGGACAGC	4	4	4	4
TACGATTAAGGC	1	1	1	1
TCGCGAAGAGAT	1	1	1	1
ATCAGGGACAGA	1371	1371	1155	1155
TTGCCTTACGAG	1	1	1	1
ATCTGGGACAGA	2	2	2	2
ATCAGGGACAGG	14	14	14	14
TGGCGAAGAGAT	887	887	731	731
ATCAGGGACAGT	23	23	23	23
AGGGAAAAATGA	6	6	5	5
TGGCCAAGAGAT	4	4	4	4
AGCAGGGACAGA	9	9	9	9
AGGAAAATTGAA	16	16	5	5
TGGCAAAGAGAT	3	3	1	1
TTCCCTTACGCG	2	2	2	2
TGGCGAAGACAT	12	12	8	8
ATCAGAGACAGA	5	5	5	5
TTGCCTAACGCG	3	3	3	3
ATGCCTTACGCG	14	14	8	8
TACAATTATGGC	1	1	1	1
TTCAGGGACAGA	1	1	1	1
TAGCCTTACGCG	1	1	1	1
TGGCGGAGAGAT	1	1	0	0
TACAATTAAAGC	1	1	1	1
ATCAGGCACAGA	19	19	18	18
AGGGACAATTGA	5	5	4	4
TGGCGAGAGATG	38	38	26	26
TACAATTAAGGC	1027	1027	792	792
TTGACTTACGCG	1	1	1	1
TAAATTAAGGCC	22	22	15	15
TACAATTAAGGA	1	1	1	1
TTACCTTACGCG	1	1	0	0
TGCAATTAAGGC	3	3	3	3
TTGCCTTACGCG	1672	1672	1071	1071
ATCAGGGAAAGA	2	2	2	2
AGGGAAAATAGA	1	1	1	1
TTGCCATACGCG	14	14	10	10
AACAATTAAGGC	16	16	13	13
TACAATAAAGGC	2	2	1	1
ATCAGGACAGAT	12	12	12	12
ATCAGGGACAAA	1	1	0	0
TGGCGAAGATAT	1	1	1	1
TTGCCTTACGTG	1	1	1	1
AGGCGAAGAGAT	18	18	16	16
AGGGTAAATTGA	1	1	1	1
GTGCCTTACGCG	4	4	4	4
ATCAGGGGCAGA	1	1	1	1
TTGCCTTCGCGT	3	3	3	3
ATCAGGGACTGA	15	15	14	14
TGGCGAAGAGCT	2	2	0	0

## HISTOGRAM	java.lang.Integer
read quality	num reads
0	15
1	396
3	1066
255	4893

