Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
Source: http://trace.ncbi.nlm.nih.gov/Traces/sra/sra.cgi?view=software
Files-Excluded:
    libs/ext
    tools/*/#Makefile#

Files: *
Copyright: none claimed
License: public-domain
                           PUBLIC DOMAIN NOTICE
              National Center for Biotechnology Information
 .
 This software/database is a "United States Government Work" under the
 terms of the United States Copyright Act.  It was written as part of
 the author's official duties as a United States Government employee and
 thus cannot be copyrighted.  This software/database is freely available
 to the public for use. The National Library of Medicine and the U.S.
 Government have not placed any restriction on its use or reproduction.
 .
 Although all reasonable efforts have been taken to ensure the accuracy
 and reliability of the software and data, the NLM and the U.S.
 Government do not and cannot warrant the performance or results that
 may be obtained by using this software or data. The NLM and the U.S.
 Government disclaim all warranties, express or implied, including
 warranties of performance, merchantability or fitness for any particular
 purpose.
 .
 Please cite the author in any work or product based on this material.

Files: interfaces/ext/bzlib.h
Copyright: © 1996-2010 Julian Seward <jseward@bzip.org>
License: bzip2
 This program, "bzip2", the associated library "libbzip2", and all
 documentation, are copyright (C) 1996-2010 Julian R Seward.  All
 rights reserved.
 .
 Redistribution and use in source and binary forms, with or without
 modification, are permitted provided that the following conditions
 are met:
 .
  1. Redistributions of source code must retain the above copyright
     notice, this list of conditions and the following disclaimer.
 .
  2. The origin of this software must not be misrepresented; you must 
     not claim that you wrote the original software.  If you use this 
     software in a product, an acknowledgment in the product 
     documentation would be appreciated but is not required.
 .
  3. Altered source versions must be plainly marked as such, and must
     not be misrepresented as being the original software.
 .
  4. The name of the author may not be used to endorse or promote 
     products derived from this software without specific prior written 
     permission.
 .
 THIS SOFTWARE IS PROVIDED BY THE AUTHOR ``AS IS'' AND ANY EXPRESS
 OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
 WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
 ARE DISCLAIMED.  IN NO EVENT SHALL THE AUTHOR BE LIABLE FOR ANY
 DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
 DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE
 GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
 INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
 WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
 NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
 SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
 .
 Julian Seward, jseward@bzip.org
 bzip2/libbzip2 version 1.0.6 of 6 September 2010
Comment: This file is part of bzip2/libbzip2, a program and library for
 lossless, block-sorting data compression.
 .
  bzip2/libbzip2 version 1.0.6 of 6 September 2010
  Copyright (C) 1996-2010 Julian Seward <jseward@bzip.org>
 .
 Please read the WARNING, DISCLAIMER and PATENTS sections in the 
 README file.
 .
 This program is released under the terms of the license contained
 in the file LICENSE.

Files: interfaces/ext/magic.h
Copyright: © Christos Zoulas 2003.
License: magic
 Redistribution and use in source and binary forms, with or without
 modification, are permitted provided that the following conditions
 are met:
  1. Redistributions of source code must retain the above copyright
     notice immediately at the beginning of the file, without modification,
     this list of conditions, and the following disclaimer.
  2. Redistributions in binary form must reproduce the above copyright
     notice, this list of conditions and the following disclaimer in the
     documentation and/or other materials provided with the distribution.
 .
 THIS SOFTWARE IS PROVIDED BY THE AUTHOR AND CONTRIBUTORS ``AS IS'' AND
 ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
 IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
 ARE DISCLAIMED. IN NO EVENT SHALL THE AUTHOR OR CONTRIBUTORS BE LIABLE FOR
 ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
 DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS
 OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION)
 HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT
 LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY
 OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF
 SUCH DAMAGE.

Files: interfaces/ext/zconf.h
Copyright: © 1995-2010 Jean-loup Gailly.
License: zlib
 This software is provided 'as-is', without any express or implied
 warranty.  In no event will the authors be held liable for any damages
 arising from the use of this software.
 .
 Permission is granted to anyone to use this software for any purpose,
 including commercial applications, and to alter it and redistribute it
 freely, subject to the following restrictions:
 .
  1. The origin of this software must not be misrepresented; you must not
     claim that you wrote the original software. If you use this software
     in a product, an acknowledgment in the product documentation would be
     appreciated but is not required.
  2. Altered source versions must be plainly marked as such, and must not be
     misrepresented as being the original software.
  3. This notice may not be removed or altered from any source distribution.
 .
  Jean-loup Gailly        Mark Adler
  jloup@gzip.org          madler@alumni.caltech.edu
 .
 .
 The data format used by the zlib library is described by RFCs (Request for
 Comments) 1950 to 1952 in the files http://www.ietf.org/rfc/rfc1950.txt
 (zlib format), rfc1951.txt (deflate format) and rfc1952.txt (gzip format).
Comment: zconf.h -- configuration of the zlib compression library
 Copyright (C) 1995-2010 Jean-loup Gailly.
 For conditions of distribution and use, see copyright notice in zlib.h

Files: interfaces/ext/regex.h
Copyright: © 1985,1989-93,1995-98,2000,2001,2002,2003,2005,2006 Free Software Foundation, Inc.
License: LGPL-2.1+

Files: libs/klib/bsearch.c
Copyright: © 1991,92,97,2000,02 Free Software Foundation, Inc.
License: LGPL-2.1+

Files: libs/klib/qsort.c
Copyright: © 1991,1992,1996,1997,1999,2004 Free Software Foundation, Inc.
License: LGPL-2.1+

Files: libs/klib/md5.c
Copyright: © 1999 Aladdin Enterprises.
License: Alladdin
 This software is provided 'as-is', without any express or implied
 warranty.  In no event will the authors be held liable for any damages
 arising from the use of this software.
 .
 Permission is granted to anyone to use this software for any purpose,
 including commercial applications, and to alter it and redistribute it
 freely, subject to the following restrictions:
 .
  1. The origin of this software must not be misrepresented; you must not
     claim that you wrote the original software. If you use this software
     in a product, an acknowledgment in the product documentation would be
     appreciated but is not required.
  2. Altered source versions must be plainly marked as such, and must not be
     misrepresented as being the original software.
  3. This notice may not be removed or altered from any source distribution.
 .
 L. Peter Deutsch
 ghost@aladdin.com
Comment: Independent implementation of MD5 (RFC 1321).
 .
 This code implements the MD5 Algorithm defined in RFC 1321.
 It is derived directly from the text of the RFC and not from the
 reference implementation.
 .
 The original and principal author of md5.c is L. Peter Deutsch
 <ghost@aladdin.com>.  Other authors are noted in the change history
 that follows (in reverse chronological order):
 .
 1999-11-04 lpd Edited comments slightly for automatic TOC extraction.
 1999-10-18 lpd Fixed typo in header comment (ansi2knr rather than md5).
 1999-05-03 lpd Original version.
Disclaimer: This software is derived from original work by Peter Deutsch.
 It has been incorporated into a body of PUBLIC DOMAIN software
 distributed by the National Center for Biotechnology Information.
 .
 Although all reasonable efforts have been taken to ensure the accuracy
 and reliability of the software and data, the NLM and the U.S.
 Government do not and cannot warrant the performance or results that
 may be obtained by using this software or data. The NLM and the U.S.
 Government disclaim all warranties, express or implied, including
 warranties of performance, merchantability or fitness for any particular
 purpose.

License: LGPL-2.1+
 The GNU C Library is free software; you can redistribute it and/or
 modify it under the terms of the GNU Lesser General Public
 License as published by the Free Software Foundation; either
 version 2.1 of the License, or (at your option) any later version.
 .
 The GNU C Library is distributed in the hope that it will be useful,
 but WITHOUT ANY WARRANTY; without even the implied warranty of
 MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
 Lesser General Public License for more details.
 .
 You should have received a copy of the GNU Lesser General Public
 License along with this library; if not, write to the Free Software
 Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301  USA
Comment: On Debian systems, the full text of the GNU Lesser General Public
 version 2.1 is accessible in the file ‘/usr/share/common-licenses/LGPL-2.1’.

