{
    "name": "rs07",
    "synonyms": [ "RS07" ],
    "result_type": "IndelModel",
    "title": "Redelings & Suchard (2007) model of insertions and deletions.",
    "citation":{"type": "article",
		"title": "Incorporating indel information into phylogeny estimation for rapidly emerging pathogens.",
		"year": "2007",
		"author": [{"name": "Redelings, Benjamin D"}, {"name": "Suchard, Marc A"}],
		"journal": {"name": "BMC Evolutionary Biology", "volume": "7", "number": "1", "pages": "40"},
		"identifier": [{"type":"doi","id":"10.1186/1471-2148-7-40"}]
	       },
    "call": "IModel.rs07[log_rate,mean_length]",
    "args": [
        {
            "arg_name": "log_rate",
            "arg_type": "Double",
            "default_value": "~laplace[-4,0.707]",
            "description": "The log of the insertion-deletion rate"
        },
        {
            "arg_name": "mean_length",
            "arg_type": "Double",
            "default_value": "~exponential[10,1]",
	    "description": "The mean indel length"
        }
    ],
    "description": "This model allows insertion and deletions (indels) of multiple residues.  Indel lengths are geometrically distributed. Insertions and deletions are symmetric in this model.\nNote that the insertion-deletion rate is normalized to the substitution rate, so that if log_rate=0, then the insertion-deletion rate is the same as the substitution rate.\nNote that the mean indel length must be at least 1.",
    "extract": "all"
}
