|-------------------------------------------------
|---- Locus: seqid=Group7.16 range=1-13337
|-------------------------------------------------
|
|  reference genes:
|    gene1
|
|  prediction genes:
|    gene1
|
|----------
     |
     |--------------------------
     |---- Begin comparison ----
     |--------------------------
     |
     |  reference transcripts:
     |    mRNA1
     |  prediction transcripts:
     |    mRNA1
     |
     | reference GFF3:
##gff-version 3
Group7.16	OGS	mRNA	613	12833	1	+	.	ID=mRNA1
Group7.16	OGS	start_codon	613	615	.	+	.	Parent=mRNA1
Group7.16	OGS	CDS	613	740	.	+	0	ID=CDS1;Parent=mRNA1
Group7.16	OGS	exon	613	740	1	+	.	Parent=mRNA1
Group7.16	OGS	intron	741	963	.	+	.	Parent=mRNA1
Group7.16	OGS	CDS	964	1048	.	+	1	ID=CDS1;Parent=mRNA1
Group7.16	OGS	exon	964	1048	1	+	.	Parent=mRNA1
Group7.16	OGS	intron	1049	1968	.	+	.	Parent=mRNA1
Group7.16	OGS	CDS	1969	2241	.	+	0	ID=CDS1;Parent=mRNA1
Group7.16	OGS	exon	1969	2241	1	+	.	Parent=mRNA1
Group7.16	OGS	intron	2242	7743	.	+	.	Parent=mRNA1
Group7.16	OGS	CDS	7744	7922	.	+	0	ID=CDS1;Parent=mRNA1
Group7.16	OGS	exon	7744	7922	1	+	.	Parent=mRNA1
Group7.16	OGS	intron	7923	9593	.	+	.	Parent=mRNA1
Group7.16	OGS	CDS	9594	9766	.	+	1	ID=CDS1;Parent=mRNA1
Group7.16	OGS	exon	9594	9766	1	+	.	Parent=mRNA1
Group7.16	OGS	intron	9767	12449	.	+	.	Parent=mRNA1
Group7.16	OGS	CDS	12450	12691	.	+	2	ID=CDS1;Parent=mRNA1
Group7.16	OGS	exon	12450	12833	1	+	.	Parent=mRNA1
Group7.16	OGS	stop_codon	12689	12691	.	+	.	Parent=mRNA1
Group7.16	OGS	three_prime_UTR	12692	12833	1	+	.	Parent=mRNA1
###
     | prediction GFF3:
##gff-version 3
Group7.16	NCBI	mRNA	613	12837	.	+	.	ID=mRNA1;Name=XM_006562493.1;Dbxref=GeneID:726786,Genbank:XM_006562493.1,BEEBASE:GB46287;gbkey=mRNA;gene=LOC726786;product=proton-coupled amino acid transporter 1-like;transcript_id=XM_006562493.1
Group7.16	NCBI	start_codon	613	615	.	+	.	Parent=mRNA1
Group7.16	NCBI	exon	613	740	.	+	.	Parent=mRNA1;Dbxref=GeneID:726786,Genbank:XM_006562493.1,BEEBASE:GB46287;gbkey=mRNA;gene=LOC726786;product=proton-coupled amino acid transporter 1-like;transcript_id=XM_006562493.1
Group7.16	NCBI	CDS	613	740	.	+	0	ID=CDS1;Parent=mRNA1;Name=XP_006562556.1;Dbxref=GeneID:726786,Genbank:XP_006562556.1,BEEBASE:GB46287;gbkey=CDS;gene=LOC726786;product=proton-coupled amino acid transporter 1-like;protein_id=XP_006562556.1
Group7.16	NCBI	intron	741	963	.	+	.	Parent=mRNA1
Group7.16	NCBI	exon	964	1048	.	+	.	Parent=mRNA1;Dbxref=GeneID:726786,Genbank:XM_006562493.1,BEEBASE:GB46287;gbkey=mRNA;gene=LOC726786;product=proton-coupled amino acid transporter 1-like;transcript_id=XM_006562493.1
Group7.16	NCBI	CDS	964	1048	.	+	1	ID=CDS1;Parent=mRNA1;Name=XP_006562556.1;Dbxref=GeneID:726786,Genbank:XP_006562556.1,BEEBASE:GB46287;gbkey=CDS;gene=LOC726786;product=proton-coupled amino acid transporter 1-like;protein_id=XP_006562556.1
Group7.16	NCBI	intron	1049	1968	.	+	.	Parent=mRNA1
Group7.16	NCBI	exon	1969	2241	.	+	.	Parent=mRNA1;Dbxref=GeneID:726786,Genbank:XM_006562493.1,BEEBASE:GB46287;gbkey=mRNA;gene=LOC726786;product=proton-coupled amino acid transporter 1-like;transcript_id=XM_006562493.1
Group7.16	NCBI	CDS	1969	2241	.	+	0	ID=CDS1;Parent=mRNA1;Name=XP_006562556.1;Dbxref=GeneID:726786,Genbank:XP_006562556.1,BEEBASE:GB46287;gbkey=CDS;gene=LOC726786;product=proton-coupled amino acid transporter 1-like;protein_id=XP_006562556.1
Group7.16	NCBI	intron	2242	7743	.	+	.	Parent=mRNA1
Group7.16	NCBI	exon	7744	7922	.	+	.	Parent=mRNA1;Dbxref=GeneID:726786,Genbank:XM_006562493.1,BEEBASE:GB46287;gbkey=mRNA;gene=LOC726786;product=proton-coupled amino acid transporter 1-like;transcript_id=XM_006562493.1
Group7.16	NCBI	CDS	7744	7922	.	+	0	ID=CDS1;Parent=mRNA1;Name=XP_006562556.1;Dbxref=GeneID:726786,Genbank:XP_006562556.1,BEEBASE:GB46287;gbkey=CDS;gene=LOC726786;product=proton-coupled amino acid transporter 1-like;protein_id=XP_006562556.1
Group7.16	NCBI	intron	7923	9275	.	+	.	Parent=mRNA1
Group7.16	NCBI	exon	9276	9308	.	+	.	Parent=mRNA1;Dbxref=GeneID:726786,Genbank:XM_006562493.1,BEEBASE:GB46287;gbkey=mRNA;gene=LOC726786;product=proton-coupled amino acid transporter 1-like;transcript_id=XM_006562493.1
Group7.16	NCBI	CDS	9276	9308	.	+	1	ID=CDS1;Parent=mRNA1;Name=XP_006562556.1;Dbxref=GeneID:726786,Genbank:XP_006562556.1,BEEBASE:GB46287;gbkey=CDS;gene=LOC726786;product=proton-coupled amino acid transporter 1-like;protein_id=XP_006562556.1
Group7.16	NCBI	intron	9309	9593	.	+	.	Parent=mRNA1
Group7.16	NCBI	exon	9594	9766	.	+	.	Parent=mRNA1;Dbxref=GeneID:726786,Genbank:XM_006562493.1,BEEBASE:GB46287;gbkey=mRNA;gene=LOC726786;product=proton-coupled amino acid transporter 1-like;transcript_id=XM_006562493.1
Group7.16	NCBI	CDS	9594	9766	.	+	1	ID=CDS1;Parent=mRNA1;Name=XP_006562556.1;Dbxref=GeneID:726786,Genbank:XP_006562556.1,BEEBASE:GB46287;gbkey=CDS;gene=LOC726786;product=proton-coupled amino acid transporter 1-like;protein_id=XP_006562556.1
Group7.16	NCBI	intron	9767	12449	.	+	.	Parent=mRNA1
Group7.16	NCBI	CDS	12450	12691	.	+	2	ID=CDS1;Parent=mRNA1;Name=XP_006562556.1;Dbxref=GeneID:726786,Genbank:XP_006562556.1,BEEBASE:GB46287;gbkey=CDS;gene=LOC726786;product=proton-coupled amino acid transporter 1-like;protein_id=XP_006562556.1
Group7.16	NCBI	exon	12450	12837	.	+	.	Parent=mRNA1;Dbxref=GeneID:726786,Genbank:XM_006562493.1,BEEBASE:GB46287;gbkey=mRNA;gene=LOC726786;product=proton-coupled amino acid transporter 1-like;transcript_id=XM_006562493.1
Group7.16	NCBI	stop_codon	12689	12691	.	+	.	Parent=mRNA1
Group7.16	NCBI	three_prime_UTR	12692	12837	.	+	.	Parent=mRNA1
###
 |
     |  CDS structure comparison
     |    6 reference CDS segments
     |        6 match prediction
     |        0 don't match prediction
     |    7 prediction CDS segments
     |        6 match reference
     |        1 don't match reference
     |    Sensitivity:                   1.000     
     |    Specificity:                   0.857     
     |    F1 Score:                      0.923     
     |    Annotation edit distance:      0.071     
     |
     |  Exon structure comparison
     |    6 reference exons
     |        5 match prediction
     |        1 don't match prediction
     |    7 prediction exons
     |        5 match reference
     |        2 don't match reference
     |    Sensitivity:                   0.833     
     |    Specificity:                   0.714     
     |    F1 Score:                      0.769     
     |    Annotation edit distance:      0.226     
     |
     |  UTR structure comparison
     |    1 reference UTR segments
     |        0 match prediction
     |        1 don't match prediction
     |    1 prediction UTR segments
     |        0 match reference
     |        1 don't match reference
     |    Sensitivity:                   0.000     
     |    Specificity:                   0.000     
     |    F1 Score:                      --        
     |    Annotation edit distance:      1.000     
     |
     |  Nucleotide-level comparison      CDS        UTRs       Overall   
     |    Matching coefficient:          0.998      1.000      0.997
     |    Correlation coefficient:       0.984      0.986      --        
     |    Sensitivity:                   1.000      1.000      --        
     |    Specificity:                   0.970      0.973      --        
     |    F1 Score:                      0.985      0.986      --        
     |    Annotation edit distance:      0.015      0.014      --        
     |
     |
     |--------------------------
     |----- End comparison -----
     |--------------------------

|-------------------------------------------------
|---- Locus: seqid=Group7.16 range=34504-53914
|-------------------------------------------------
|
|  reference genes:
|    gene2
|
|  prediction genes:
|    None!
|
|----------
     |
     | No comparisons were performed for this locus.
     |
|-------------------------------------------------
|---- Locus: seqid=Group7.16 range=53915-73536
|-------------------------------------------------
|
|  reference genes:
|    gene3
|
|  prediction genes:
|    gene2
|
|----------
     |
     |--------------------------
     |---- Begin comparison ----
     |--------------------------
     |
     |  reference transcripts:
     |    mRNA3
     |  prediction transcripts:
     |    mRNA2
     |
     | reference GFF3:
##gff-version 3
Group7.16	OGS	mRNA	54738	72910	1	+	.	ID=mRNA3
Group7.16	OGS	start_codon	54738	54740	.	+	.	Parent=mRNA3
Group7.16	OGS	CDS	54738	54767	.	+	0	ID=CDS3;Parent=mRNA3
Group7.16	OGS	exon	54738	54767	.	+	.	Parent=mRNA3
Group7.16	OGS	intron	54768	54872	.	+	.	Parent=mRNA3
Group7.16	OGS	CDS	54873	55007	.	+	0	ID=CDS3;Parent=mRNA3
Group7.16	OGS	exon	54873	55007	.	+	.	Parent=mRNA3
Group7.16	OGS	intron	55008	58320	.	+	.	Parent=mRNA3
Group7.16	OGS	CDS	58321	58528	.	+	0	ID=CDS3;Parent=mRNA3
Group7.16	OGS	exon	58321	58528	.	+	.	Parent=mRNA3
Group7.16	OGS	intron	58529	61485	.	+	.	Parent=mRNA3
Group7.16	OGS	CDS	61486	61964	.	+	2	ID=CDS3;Parent=mRNA3
Group7.16	OGS	exon	61486	61964	.	+	.	Parent=mRNA3
Group7.16	OGS	intron	61965	70078	.	+	.	Parent=mRNA3
Group7.16	OGS	CDS	70079	70256	.	+	0	ID=CDS3;Parent=mRNA3
Group7.16	OGS	exon	70079	70256	.	+	.	Parent=mRNA3
Group7.16	OGS	intron	70257	70375	.	+	.	Parent=mRNA3
Group7.16	OGS	CDS	70376	70597	.	+	2	ID=CDS3;Parent=mRNA3
Group7.16	OGS	exon	70376	70597	.	+	.	Parent=mRNA3
Group7.16	OGS	intron	70598	70756	.	+	.	Parent=mRNA3
Group7.16	OGS	CDS	70757	70986	.	+	2	ID=CDS3;Parent=mRNA3
Group7.16	OGS	exon	70757	70986	.	+	.	Parent=mRNA3
Group7.16	OGS	intron	70987	72748	.	+	.	Parent=mRNA3
Group7.16	OGS	CDS	72749	72910	.	+	0	ID=CDS3;Parent=mRNA3
Group7.16	OGS	exon	72749	72910	.	+	.	Parent=mRNA3
Group7.16	OGS	stop_codon	72908	72910	.	+	.	Parent=mRNA3
###
     | prediction GFF3:
##gff-version 3
Group7.16	NCBI	mRNA	54607	73036	.	+	.	ID=mRNA2;Name=XM_001122105.3;Dbxref=GeneID:726362,Genbank:XM_001122105.3,BEEBASE:GB46289;gbkey=mRNA;gene=LOC726362;product=luciferin 4-monooxygenase-like;transcript_id=XM_001122105.3
Group7.16	NCBI	five_prime_UTR	54607	54608	.	+	.	Parent=mRNA2
Group7.16	NCBI	exon	54607	54767	.	+	.	Parent=mRNA2;Dbxref=GeneID:726362,Genbank:XM_001122105.3,BEEBASE:GB46289;gbkey=mRNA;gene=LOC726362;product=luciferin 4-monooxygenase-like;transcript_id=XM_001122105.3
Group7.16	NCBI	start_codon	54609	54611	.	+	.	Parent=mRNA2
Group7.16	NCBI	CDS	54609	54767	.	+	0	ID=CDS2;Parent=mRNA2;Name=XP_001122105.3;Dbxref=GeneID:726362,Genbank:XP_001122105.3,BEEBASE:GB46289;gbkey=CDS;gene=LOC726362;product=luciferin 4-monooxygenase;protein_id=XP_001122105.3
Group7.16	NCBI	intron	54768	54872	.	+	.	Parent=mRNA2
Group7.16	NCBI	exon	54873	55007	.	+	.	Parent=mRNA2;Dbxref=GeneID:726362,Genbank:XM_001122105.3,BEEBASE:GB46289;gbkey=mRNA;gene=LOC726362;product=luciferin 4-monooxygenase-like;transcript_id=XM_001122105.3
Group7.16	NCBI	CDS	54873	55007	.	+	0	ID=CDS2;Parent=mRNA2;Name=XP_001122105.3;Dbxref=GeneID:726362,Genbank:XP_001122105.3,BEEBASE:GB46289;gbkey=CDS;gene=LOC726362;product=luciferin 4-monooxygenase;protein_id=XP_001122105.3
Group7.16	NCBI	intron	55008	58320	.	+	.	Parent=mRNA2
Group7.16	NCBI	exon	58321	58528	.	+	.	Parent=mRNA2;Dbxref=GeneID:726362,Genbank:XM_001122105.3,BEEBASE:GB46289;gbkey=mRNA;gene=LOC726362;product=luciferin 4-monooxygenase-like;transcript_id=XM_001122105.3
Group7.16	NCBI	CDS	58321	58528	.	+	0	ID=CDS2;Parent=mRNA2;Name=XP_001122105.3;Dbxref=GeneID:726362,Genbank:XP_001122105.3,BEEBASE:GB46289;gbkey=CDS;gene=LOC726362;product=luciferin 4-monooxygenase;protein_id=XP_001122105.3
Group7.16	NCBI	intron	58529	61485	.	+	.	Parent=mRNA2
Group7.16	NCBI	exon	61486	61964	.	+	.	Parent=mRNA2;Dbxref=GeneID:726362,Genbank:XM_001122105.3,BEEBASE:GB46289;gbkey=mRNA;gene=LOC726362;product=luciferin 4-monooxygenase-like;transcript_id=XM_001122105.3
Group7.16	NCBI	CDS	61486	61964	.	+	2	ID=CDS2;Parent=mRNA2;Name=XP_001122105.3;Dbxref=GeneID:726362,Genbank:XP_001122105.3,BEEBASE:GB46289;gbkey=CDS;gene=LOC726362;product=luciferin 4-monooxygenase;protein_id=XP_001122105.3
Group7.16	NCBI	intron	61965	70078	.	+	.	Parent=mRNA2
Group7.16	NCBI	exon	70079	70256	.	+	.	Parent=mRNA2;Dbxref=GeneID:726362,Genbank:XM_001122105.3,BEEBASE:GB46289;gbkey=mRNA;gene=LOC726362;product=luciferin 4-monooxygenase-like;transcript_id=XM_001122105.3
Group7.16	NCBI	CDS	70079	70256	.	+	0	ID=CDS2;Parent=mRNA2;Name=XP_001122105.3;Dbxref=GeneID:726362,Genbank:XP_001122105.3,BEEBASE:GB46289;gbkey=CDS;gene=LOC726362;product=luciferin 4-monooxygenase;protein_id=XP_001122105.3
Group7.16	NCBI	intron	70257	70375	.	+	.	Parent=mRNA2
Group7.16	NCBI	exon	70376	70597	.	+	.	Parent=mRNA2;Dbxref=GeneID:726362,Genbank:XM_001122105.3,BEEBASE:GB46289;gbkey=mRNA;gene=LOC726362;product=luciferin 4-monooxygenase-like;transcript_id=XM_001122105.3
Group7.16	NCBI	CDS	70376	70597	.	+	2	ID=CDS2;Parent=mRNA2;Name=XP_001122105.3;Dbxref=GeneID:726362,Genbank:XP_001122105.3,BEEBASE:GB46289;gbkey=CDS;gene=LOC726362;product=luciferin 4-monooxygenase;protein_id=XP_001122105.3
Group7.16	NCBI	intron	70598	70756	.	+	.	Parent=mRNA2
Group7.16	NCBI	exon	70757	70986	.	+	.	Parent=mRNA2;Dbxref=GeneID:726362,Genbank:XM_001122105.3,BEEBASE:GB46289;gbkey=mRNA;gene=LOC726362;product=luciferin 4-monooxygenase-like;transcript_id=XM_001122105.3
Group7.16	NCBI	CDS	70757	70986	.	+	2	ID=CDS2;Parent=mRNA2;Name=XP_001122105.3;Dbxref=GeneID:726362,Genbank:XP_001122105.3,BEEBASE:GB46289;gbkey=CDS;gene=LOC726362;product=luciferin 4-monooxygenase;protein_id=XP_001122105.3
Group7.16	NCBI	intron	70987	72748	.	+	.	Parent=mRNA2
Group7.16	NCBI	CDS	72749	72910	.	+	0	ID=CDS2;Parent=mRNA2;Name=XP_001122105.3;Dbxref=GeneID:726362,Genbank:XP_001122105.3,BEEBASE:GB46289;gbkey=CDS;gene=LOC726362;product=luciferin 4-monooxygenase;protein_id=XP_001122105.3
Group7.16	NCBI	exon	72749	73036	.	+	.	Parent=mRNA2;Dbxref=GeneID:726362,Genbank:XM_001122105.3,BEEBASE:GB46289;gbkey=mRNA;gene=LOC726362;product=luciferin 4-monooxygenase-like;transcript_id=XM_001122105.3
Group7.16	NCBI	stop_codon	72908	72910	.	+	.	Parent=mRNA2
Group7.16	NCBI	three_prime_UTR	72911	73036	.	+	.	Parent=mRNA2
###
 |
     |  CDS structure comparison
     |    8 reference CDS segments
     |        7 match prediction
     |        1 don't match prediction
     |    8 prediction CDS segments
     |        7 match reference
     |        1 don't match reference
     |    Sensitivity:                   0.875     
     |    Specificity:                   0.875     
     |    F1 Score:                      0.875     
     |    Annotation edit distance:      0.125     
     |
     |  Exon structure comparison
     |    8 reference exons
     |        6 match prediction
     |        2 don't match prediction
     |    8 prediction exons
     |        6 match reference
     |        2 don't match reference
     |    Sensitivity:                   0.750     
     |    Specificity:                   0.750     
     |    F1 Score:                      0.750     
     |    Annotation edit distance:      0.250     
     |
     |  UTR structure comparison
     |    0 reference UTR segments
     |        0 match prediction
     |        0 don't match prediction
     |    2 prediction UTR segments
     |        0 match reference
     |        2 don't match reference
     |    Sensitivity:                   --        
     |    Specificity:                   0.000     
     |    F1 Score:                      --        
     |    Annotation edit distance:      --        
     |
     |  Nucleotide-level comparison      CDS        UTRs       Overall   
     |    Matching coefficient:          0.993      0.993      0.987
     |    Correlation coefficient:       0.959      --         --        
     |    Sensitivity:                   1.000      --         --        
     |    Specificity:                   0.927      0.000      --        
     |    F1 Score:                      0.962      --         --        
     |    Annotation edit distance:      0.036      --         --        
     |
     |
     |--------------------------
     |----- End comparison -----
     |--------------------------

|-------------------------------------------------
|---- Locus: seqid=Group7.16 range=75213-79994
|-------------------------------------------------
|
|  reference genes:
|    gene4
|
|  prediction genes:
|    gene3
|
|----------
     |
     |--------------------------
     |---- Begin comparison ----
     |--------------------------
     |
     |  reference transcripts:
     |    mRNA4
     |  prediction transcripts:
     |    mRNA4
     |
     | reference GFF3:
##gff-version 3
Group7.16	OGS	mRNA	75757	79210	1	-	.	ID=mRNA4
Group7.16	OGS	three_prime_UTR	75757	75834	1	-	.	Parent=mRNA4
Group7.16	OGS	exon	75757	76028	1	-	.	Parent=mRNA4
Group7.16	OGS	stop_codon	75835	75837	.	-	.	Parent=mRNA4
Group7.16	OGS	CDS	75835	76028	.	-	2	ID=CDS4;Parent=mRNA4
Group7.16	OGS	intron	76029	76285	.	-	.	Parent=mRNA4
Group7.16	OGS	CDS	76286	76370	.	-	0	ID=CDS4;Parent=mRNA4
Group7.16	OGS	exon	76286	76370	1	-	.	Parent=mRNA4
Group7.16	OGS	intron	76371	77075	.	-	.	Parent=mRNA4
Group7.16	OGS	CDS	77076	77278	.	-	2	ID=CDS4;Parent=mRNA4
Group7.16	OGS	exon	77076	77278	1	-	.	Parent=mRNA4
Group7.16	OGS	intron	77279	77348	.	-	.	Parent=mRNA4
Group7.16	OGS	CDS	77349	77436	.	-	0	ID=CDS4;Parent=mRNA4
Group7.16	OGS	exon	77349	77436	1	-	.	Parent=mRNA4
Group7.16	OGS	intron	77437	78118	.	-	.	Parent=mRNA4
Group7.16	OGS	CDS	78119	78631	.	-	0	ID=CDS4;Parent=mRNA4
Group7.16	OGS	exon	78119	78631	1	-	.	Parent=mRNA4
Group7.16	OGS	intron	78632	78903	.	-	.	Parent=mRNA4
Group7.16	OGS	CDS	78904	79047	.	-	0	ID=CDS4;Parent=mRNA4
Group7.16	OGS	exon	78904	79210	1	-	.	Parent=mRNA4
Group7.16	OGS	start_codon	79045	79047	.	-	.	Parent=mRNA4
Group7.16	OGS	five_prime_UTR	79048	79210	1	-	.	Parent=mRNA4
###
     | prediction GFF3:
##gff-version 3
Group7.16	NCBI	mRNA	75713	79494	.	-	.	ID=mRNA4;Name=XM_623919.3;Dbxref=GeneID:551524,Genbank:XM_623919.3,BEEBASE:GB46286;gbkey=mRNA;gene=LOC551524;product=zinc carboxypeptidase A 1-like%2C transcript variant X2;transcript_id=XM_623919.3
Group7.16	NCBI	three_prime_UTR	75713	75834	.	-	.	Parent=mRNA4
Group7.16	NCBI	exon	75713	76028	.	-	.	Parent=mRNA4;Dbxref=GeneID:551524,Genbank:XM_623919.3,BEEBASE:GB46286;gbkey=mRNA;gene=LOC551524;product=zinc carboxypeptidase A 1-like%2C transcript variant X2;transcript_id=XM_623919.3
Group7.16	NCBI	stop_codon	75835	75837	.	-	.	Parent=mRNA4
Group7.16	NCBI	CDS	75835	76028	.	-	2	ID=CDS4;Parent=mRNA4;Name=XP_623922.2;Dbxref=GeneID:551524,Genbank:XP_623922.2,BEEBASE:GB46286;gbkey=CDS;gene=LOC551524;product=zinc carboxypeptidase A 1-like isoform X2;protein_id=XP_623922.2
Group7.16	NCBI	intron	76029	76285	.	-	.	Parent=mRNA4
Group7.16	NCBI	exon	76286	76370	.	-	.	Parent=mRNA4;Dbxref=GeneID:551524,Genbank:XM_623919.3,BEEBASE:GB46286;gbkey=mRNA;gene=LOC551524;product=zinc carboxypeptidase A 1-like%2C transcript variant X2;transcript_id=XM_623919.3
Group7.16	NCBI	CDS	76286	76370	.	-	0	ID=CDS4;Parent=mRNA4;Name=XP_623922.2;Dbxref=GeneID:551524,Genbank:XP_623922.2,BEEBASE:GB46286;gbkey=CDS;gene=LOC551524;product=zinc carboxypeptidase A 1-like isoform X2;protein_id=XP_623922.2
Group7.16	NCBI	intron	76371	77075	.	-	.	Parent=mRNA4
Group7.16	NCBI	exon	77076	77278	.	-	.	Parent=mRNA4;Dbxref=GeneID:551524,Genbank:XM_623919.3,BEEBASE:GB46286;gbkey=mRNA;gene=LOC551524;product=zinc carboxypeptidase A 1-like%2C transcript variant X2;transcript_id=XM_623919.3
Group7.16	NCBI	CDS	77076	77278	.	-	2	ID=CDS4;Parent=mRNA4;Name=XP_623922.2;Dbxref=GeneID:551524,Genbank:XP_623922.2,BEEBASE:GB46286;gbkey=CDS;gene=LOC551524;product=zinc carboxypeptidase A 1-like isoform X2;protein_id=XP_623922.2
Group7.16	NCBI	intron	77279	77348	.	-	.	Parent=mRNA4
Group7.16	NCBI	exon	77349	77436	.	-	.	Parent=mRNA4;Dbxref=GeneID:551524,Genbank:XM_623919.3,BEEBASE:GB46286;gbkey=mRNA;gene=LOC551524;product=zinc carboxypeptidase A 1-like%2C transcript variant X2;transcript_id=XM_623919.3
Group7.16	NCBI	CDS	77349	77436	.	-	0	ID=CDS4;Parent=mRNA4;Name=XP_623922.2;Dbxref=GeneID:551524,Genbank:XP_623922.2,BEEBASE:GB46286;gbkey=CDS;gene=LOC551524;product=zinc carboxypeptidase A 1-like isoform X2;protein_id=XP_623922.2
Group7.16	NCBI	intron	77437	78118	.	-	.	Parent=mRNA4
Group7.16	NCBI	exon	78119	78631	.	-	.	Parent=mRNA4;Dbxref=GeneID:551524,Genbank:XM_623919.3,BEEBASE:GB46286;gbkey=mRNA;gene=LOC551524;product=zinc carboxypeptidase A 1-like%2C transcript variant X2;transcript_id=XM_623919.3
Group7.16	NCBI	CDS	78119	78631	.	-	0	ID=CDS4;Parent=mRNA4;Name=XP_623922.2;Dbxref=GeneID:551524,Genbank:XP_623922.2,BEEBASE:GB46286;gbkey=CDS;gene=LOC551524;product=zinc carboxypeptidase A 1-like isoform X2;protein_id=XP_623922.2
Group7.16	NCBI	intron	78632	78903	.	-	.	Parent=mRNA4
Group7.16	NCBI	CDS	78904	79047	.	-	0	ID=CDS4;Parent=mRNA4;Name=XP_623922.2;Dbxref=GeneID:551524,Genbank:XP_623922.2,BEEBASE:GB46286;gbkey=CDS;gene=LOC551524;product=zinc carboxypeptidase A 1-like isoform X2;protein_id=XP_623922.2
Group7.16	NCBI	exon	78904	79055	.	-	.	Parent=mRNA4;Dbxref=GeneID:551524,Genbank:XM_623919.3,BEEBASE:GB46286;gbkey=mRNA;gene=LOC551524;product=zinc carboxypeptidase A 1-like%2C transcript variant X2;transcript_id=XM_623919.3
Group7.16	NCBI	start_codon	79045	79047	.	-	.	Parent=mRNA4
Group7.16	NCBI	five_prime_UTR	79048	79055	.	-	.	Parent=mRNA4
Group7.16	NCBI	intron	79056	79460	.	-	.	Parent=mRNA4
Group7.16	NCBI	exon	79461	79494	.	-	.	Parent=mRNA4;Dbxref=GeneID:551524,Genbank:XM_623919.3,BEEBASE:GB46286;gbkey=mRNA;gene=LOC551524;product=zinc carboxypeptidase A 1-like%2C transcript variant X2;transcript_id=XM_623919.3
Group7.16	NCBI	five_prime_UTR	79461	79494	.	-	.	Parent=mRNA4
###
 |
     |  CDS structure comparison
     |    6 reference  CDS segments
     |    6 prediction CDS segments
     |    CDS structures match perfectly!
     |
     |  Exon structure comparison
     |    6 reference exons
     |        4 match prediction
     |        2 don't match prediction
     |    7 prediction exons
     |        4 match reference
     |        3 don't match reference
     |    Sensitivity:                   0.667     
     |    Specificity:                   0.571     
     |    F1 Score:                      0.615     
     |    Annotation edit distance:      0.381     
     |
     |  UTR structure comparison
     |    2 reference UTR segments
     |        0 match prediction
     |        2 don't match prediction
     |    3 prediction UTR segments
     |        0 match reference
     |        3 don't match reference
     |    Sensitivity:                   0.000     
     |    Specificity:                   0.000     
     |    F1 Score:                      --        
     |    Annotation edit distance:      1.000     
     |
     |  Nucleotide-level comparison      CDS        UTRs       Overall   
     |    Matching coefficient:          1.000      0.951      0.899
     |    Correlation coefficient:       1.000      0.408      --        
     |    Sensitivity:                   1.000      0.357      --        
     |    Specificity:                   1.000      0.524      --        
     |    F1 Score:                      1.000      0.425      --        
     |    Annotation edit distance:      0.000      0.559      --        
     |
     |
     |--------------------------
     |----- End comparison -----
     |--------------------------
     |
     |--- Unmatched prediction transcripts ---
     |----------------------------------------
     |
     |    mRNA3
     |

|-------------------------------------------------
|---- Locus: seqid=Group7.16 range=87801-110242
|-------------------------------------------------
|
|  reference genes:
|    gene6
|    gene5
|
|  prediction genes:
|    gene5
|    gene4
|
|----------
     |
     |--------------------------
     |---- Begin comparison ----
     |--------------------------
     |
     |  reference transcripts:
     |    mRNA6
     |  prediction transcripts:
     |    mRNA6
     |
     | reference GFF3:
##gff-version 3
Group7.16	OGS	mRNA	104797	107359	1	-	.	ID=mRNA6
Group7.16	OGS	three_prime_UTR	104797	105353	1	-	.	Parent=mRNA6
Group7.16	OGS	exon	104797	105898	1	-	.	Parent=mRNA6
Group7.16	OGS	stop_codon	105354	105356	.	-	.	Parent=mRNA6
Group7.16	OGS	CDS	105354	105898	.	-	2	ID=CDS6;Parent=mRNA6
Group7.16	OGS	intron	105899	106079	.	-	.	Parent=mRNA6
Group7.16	OGS	CDS	106080	106328	.	-	2	ID=CDS6;Parent=mRNA6
Group7.16	OGS	exon	106080	106328	1	-	.	Parent=mRNA6
Group7.16	OGS	intron	106329	106539	.	-	.	Parent=mRNA6
Group7.16	OGS	CDS	106540	106664	.	-	1	ID=CDS6;Parent=mRNA6
Group7.16	OGS	exon	106540	106664	1	-	.	Parent=mRNA6
Group7.16	OGS	intron	106665	106765	.	-	.	Parent=mRNA6
Group7.16	OGS	CDS	106766	107160	.	-	0	ID=CDS6;Parent=mRNA6
Group7.16	OGS	exon	106766	107359	1	-	.	Parent=mRNA6
Group7.16	OGS	start_codon	107158	107160	.	-	.	Parent=mRNA6
Group7.16	OGS	five_prime_UTR	107161	107359	1	-	.	Parent=mRNA6
###
     | prediction GFF3:
##gff-version 3
Group7.16	NCBI	mRNA	105315	107360	.	-	.	ID=mRNA6;Name=XM_006562491.1;Dbxref=GeneID:102655754,Genbank:XM_006562491.1;gbkey=mRNA;gene=LOC102655754;product=enolase-like;transcript_id=XM_006562491.1
Group7.16	NCBI	three_prime_UTR	105315	105353	.	-	.	Parent=mRNA6
Group7.16	NCBI	exon	105315	105898	.	-	.	Parent=mRNA6;Dbxref=GeneID:102655754,Genbank:XM_006562491.1;gbkey=mRNA;gene=LOC102655754;product=enolase-like;transcript_id=XM_006562491.1
Group7.16	NCBI	stop_codon	105354	105356	.	-	.	Parent=mRNA6
Group7.16	NCBI	CDS	105354	105898	.	-	2	ID=CDS6;Parent=mRNA6;Name=XP_006562554.1;Dbxref=GeneID:102655754,Genbank:XP_006562554.1;gbkey=CDS;gene=LOC102655754;product=enolase-like;protein_id=XP_006562554.1
Group7.16	NCBI	intron	105899	106079	.	-	.	Parent=mRNA6
Group7.16	NCBI	exon	106080	106328	.	-	.	Parent=mRNA6;Dbxref=GeneID:102655754,Genbank:XM_006562491.1;gbkey=mRNA;gene=LOC102655754;product=enolase-like;transcript_id=XM_006562491.1
Group7.16	NCBI	CDS	106080	106328	.	-	2	ID=CDS6;Parent=mRNA6;Name=XP_006562554.1;Dbxref=GeneID:102655754,Genbank:XP_006562554.1;gbkey=CDS;gene=LOC102655754;product=enolase-like;protein_id=XP_006562554.1
Group7.16	NCBI	intron	106329	106539	.	-	.	Parent=mRNA6
Group7.16	NCBI	exon	106540	106664	.	-	.	Parent=mRNA6;Dbxref=GeneID:102655754,Genbank:XM_006562491.1;gbkey=mRNA;gene=LOC102655754;product=enolase-like;transcript_id=XM_006562491.1
Group7.16	NCBI	CDS	106540	106664	.	-	1	ID=CDS6;Parent=mRNA6;Name=XP_006562554.1;Dbxref=GeneID:102655754,Genbank:XP_006562554.1;gbkey=CDS;gene=LOC102655754;product=enolase-like;protein_id=XP_006562554.1
Group7.16	NCBI	intron	106665	106765	.	-	.	Parent=mRNA6
Group7.16	NCBI	CDS	106766	107160	.	-	0	ID=CDS6;Parent=mRNA6;Name=XP_006562554.1;Dbxref=GeneID:102655754,Genbank:XP_006562554.1;gbkey=CDS;gene=LOC102655754;product=enolase-like;protein_id=XP_006562554.1
Group7.16	NCBI	exon	106766	107360	.	-	.	Parent=mRNA6;Dbxref=GeneID:102655754,Genbank:XM_006562491.1;gbkey=mRNA;gene=LOC102655754;product=enolase-like;transcript_id=XM_006562491.1
Group7.16	NCBI	start_codon	107158	107160	.	-	.	Parent=mRNA6
Group7.16	NCBI	five_prime_UTR	107161	107360	.	-	.	Parent=mRNA6
###
 |
     |  CDS structure comparison
     |    4 reference  CDS segments
     |    4 prediction CDS segments
     |    CDS structures match perfectly!
     |
     |  Exon structure comparison
     |    4 reference exons
     |        2 match prediction
     |        2 don't match prediction
     |    4 prediction exons
     |        2 match reference
     |        2 don't match reference
     |    Sensitivity:                   0.500     
     |    Specificity:                   0.500     
     |    F1 Score:                      0.500     
     |    Annotation edit distance:      0.500     
     |
     |  UTR structure comparison
     |    2 reference UTR segments
     |        0 match prediction
     |        2 don't match prediction
     |    2 prediction UTR segments
     |        0 match reference
     |        2 don't match reference
     |    Sensitivity:                   0.000     
     |    Specificity:                   0.000     
     |    F1 Score:                      --        
     |    Annotation edit distance:      1.000     
     |
     |  Nucleotide-level comparison      CDS        UTRs       Overall   
     |    Matching coefficient:          1.000      0.977      0.977
     |    Correlation coefficient:       1.000      0.553      --        
     |    Sensitivity:                   1.000      0.315      --        
     |    Specificity:                   1.000      0.996      --        
     |    F1 Score:                      1.000      0.478      --        
     |    Annotation edit distance:      0.000      0.345      --        
     |
     |
     |--------------------------
     |----- End comparison -----
     |--------------------------
     |
     |--------------------------
     |---- Begin comparison ----
     |--------------------------
     |
     |  reference transcripts:
     |    mRNA5
     |  prediction transcripts:
     |    mRNA5
     |
     | reference GFF3:
##gff-version 3
Group7.16	OGS	mRNA	88301	109742	1	+	.	ID=mRNA5
Group7.16	OGS	start_codon	88301	88303	.	+	.	Parent=mRNA5
Group7.16	OGS	CDS	88301	88389	.	+	0	ID=CDS5;Parent=mRNA5
Group7.16	OGS	exon	88301	88389	1	+	.	Parent=mRNA5
Group7.16	OGS	intron	88390	102373	.	+	.	Parent=mRNA5
Group7.16	OGS	CDS	102374	102569	.	+	1	ID=CDS5;Parent=mRNA5
Group7.16	OGS	exon	102374	102569	1	+	.	Parent=mRNA5
Group7.16	OGS	intron	102570	103098	.	+	.	Parent=mRNA5
Group7.16	OGS	CDS	103099	103330	.	+	0	ID=CDS5;Parent=mRNA5
Group7.16	OGS	exon	103099	103330	1	+	.	Parent=mRNA5
Group7.16	OGS	intron	103331	103589	.	+	.	Parent=mRNA5
Group7.16	OGS	CDS	103590	103761	.	+	2	ID=CDS5;Parent=mRNA5
Group7.16	OGS	exon	103590	103761	1	+	.	Parent=mRNA5
Group7.16	OGS	intron	103762	104323	.	+	.	Parent=mRNA5
Group7.16	OGS	CDS	104324	104516	.	+	1	ID=CDS5;Parent=mRNA5
Group7.16	OGS	exon	104324	104516	1	+	.	Parent=mRNA5
Group7.16	OGS	intron	104517	104603	.	+	.	Parent=mRNA5
Group7.16	OGS	CDS	104604	104759	.	+	0	ID=CDS5;Parent=mRNA5
Group7.16	OGS	exon	104604	104759	1	+	.	Parent=mRNA5
Group7.16	OGS	intron	104760	104871	.	+	.	Parent=mRNA5
Group7.16	OGS	CDS	104872	105039	.	+	0	ID=CDS5;Parent=mRNA5
Group7.16	OGS	exon	104872	105039	1	+	.	Parent=mRNA5
Group7.16	OGS	intron	105040	105118	.	+	.	Parent=mRNA5
Group7.16	OGS	CDS	105119	105308	.	+	0	ID=CDS5;Parent=mRNA5
Group7.16	OGS	exon	105119	105308	1	+	.	Parent=mRNA5
Group7.16	OGS	intron	105309	107586	.	+	.	Parent=mRNA5
Group7.16	OGS	CDS	107587	107832	.	+	2	ID=CDS5;Parent=mRNA5
Group7.16	OGS	exon	107587	107832	1	+	.	Parent=mRNA5
Group7.16	OGS	intron	107833	108074	.	+	.	Parent=mRNA5
Group7.16	OGS	CDS	108075	108271	.	+	2	ID=CDS5;Parent=mRNA5
Group7.16	OGS	exon	108075	109742	1	+	.	Parent=mRNA5
Group7.16	OGS	stop_codon	108269	108271	.	+	.	Parent=mRNA5
Group7.16	OGS	three_prime_UTR	108272	109742	1	+	.	Parent=mRNA5
###
     | prediction GFF3:
##gff-version 3
Group7.16	NCBI	mRNA	102349	108280	.	+	.	ID=mRNA5;Name=XM_006562492.1;Dbxref=GeneID:409624,Genbank:XM_006562492.1,BEEBASE:GB46290;gbkey=mRNA;gene=LOC409624;product=acetate-CoA ligase 1;transcript_id=XM_006562492.1
Group7.16	NCBI	five_prime_UTR	102349	102497	.	+	.	Parent=mRNA5
Group7.16	NCBI	exon	102349	102569	.	+	.	Parent=mRNA5;Dbxref=GeneID:409624,Genbank:XM_006562492.1,BEEBASE:GB46290;gbkey=mRNA;gene=LOC409624;product=acetate-CoA ligase 1;transcript_id=XM_006562492.1
Group7.16	NCBI	start_codon	102498	102500	.	+	.	Parent=mRNA5
Group7.16	NCBI	CDS	102498	102569	.	+	0	ID=CDS5;Parent=mRNA5;Name=XP_006562555.1;Dbxref=GeneID:409624,Genbank:XP_006562555.1,BEEBASE:GB46290;gbkey=CDS;gene=LOC409624;product=acetyl-coenzyme A synthetase-like;protein_id=XP_006562555.1
Group7.16	NCBI	intron	102570	103098	.	+	.	Parent=mRNA5
Group7.16	NCBI	exon	103099	103330	.	+	.	Parent=mRNA5;Dbxref=GeneID:409624,Genbank:XM_006562492.1,BEEBASE:GB46290;gbkey=mRNA;gene=LOC409624;product=acetate-CoA ligase 1;transcript_id=XM_006562492.1
Group7.16	NCBI	CDS	103099	103330	.	+	0	ID=CDS5;Parent=mRNA5;Name=XP_006562555.1;Dbxref=GeneID:409624,Genbank:XP_006562555.1,BEEBASE:GB46290;gbkey=CDS;gene=LOC409624;product=acetyl-coenzyme A synthetase-like;protein_id=XP_006562555.1
Group7.16	NCBI	intron	103331	103589	.	+	.	Parent=mRNA5
Group7.16	NCBI	exon	103590	103761	.	+	.	Parent=mRNA5;Dbxref=GeneID:409624,Genbank:XM_006562492.1,BEEBASE:GB46290;gbkey=mRNA;gene=LOC409624;product=acetate-CoA ligase 1;transcript_id=XM_006562492.1
Group7.16	NCBI	CDS	103590	103761	.	+	2	ID=CDS5;Parent=mRNA5;Name=XP_006562555.1;Dbxref=GeneID:409624,Genbank:XP_006562555.1,BEEBASE:GB46290;gbkey=CDS;gene=LOC409624;product=acetyl-coenzyme A synthetase-like;protein_id=XP_006562555.1
Group7.16	NCBI	intron	103762	104323	.	+	.	Parent=mRNA5
Group7.16	NCBI	exon	104324	104516	.	+	.	Parent=mRNA5;Dbxref=GeneID:409624,Genbank:XM_006562492.1,BEEBASE:GB46290;gbkey=mRNA;gene=LOC409624;product=acetate-CoA ligase 1;transcript_id=XM_006562492.1
Group7.16	NCBI	CDS	104324	104516	.	+	1	ID=CDS5;Parent=mRNA5;Name=XP_006562555.1;Dbxref=GeneID:409624,Genbank:XP_006562555.1,BEEBASE:GB46290;gbkey=CDS;gene=LOC409624;product=acetyl-coenzyme A synthetase-like;protein_id=XP_006562555.1
Group7.16	NCBI	intron	104517	104603	.	+	.	Parent=mRNA5
Group7.16	NCBI	exon	104604	104759	.	+	.	Parent=mRNA5;Dbxref=GeneID:409624,Genbank:XM_006562492.1,BEEBASE:GB46290;gbkey=mRNA;gene=LOC409624;product=acetate-CoA ligase 1;transcript_id=XM_006562492.1
Group7.16	NCBI	CDS	104604	104759	.	+	0	ID=CDS5;Parent=mRNA5;Name=XP_006562555.1;Dbxref=GeneID:409624,Genbank:XP_006562555.1,BEEBASE:GB46290;gbkey=CDS;gene=LOC409624;product=acetyl-coenzyme A synthetase-like;protein_id=XP_006562555.1
Group7.16	NCBI	intron	104760	104871	.	+	.	Parent=mRNA5
Group7.16	NCBI	exon	104872	105039	.	+	.	Parent=mRNA5;Dbxref=GeneID:409624,Genbank:XM_006562492.1,BEEBASE:GB46290;gbkey=mRNA;gene=LOC409624;product=acetate-CoA ligase 1;transcript_id=XM_006562492.1
Group7.16	NCBI	CDS	104872	105039	.	+	0	ID=CDS5;Parent=mRNA5;Name=XP_006562555.1;Dbxref=GeneID:409624,Genbank:XP_006562555.1,BEEBASE:GB46290;gbkey=CDS;gene=LOC409624;product=acetyl-coenzyme A synthetase-like;protein_id=XP_006562555.1
Group7.16	NCBI	intron	105040	105118	.	+	.	Parent=mRNA5
Group7.16	NCBI	exon	105119	105308	.	+	.	Parent=mRNA5;Dbxref=GeneID:409624,Genbank:XM_006562492.1,BEEBASE:GB46290;gbkey=mRNA;gene=LOC409624;product=acetate-CoA ligase 1;transcript_id=XM_006562492.1
Group7.16	NCBI	CDS	105119	105308	.	+	0	ID=CDS5;Parent=mRNA5;Name=XP_006562555.1;Dbxref=GeneID:409624,Genbank:XP_006562555.1,BEEBASE:GB46290;gbkey=CDS;gene=LOC409624;product=acetyl-coenzyme A synthetase-like;protein_id=XP_006562555.1
Group7.16	NCBI	intron	105309	107586	.	+	.	Parent=mRNA5
Group7.16	NCBI	exon	107587	107832	.	+	.	Parent=mRNA5;Dbxref=GeneID:409624,Genbank:XM_006562492.1,BEEBASE:GB46290;gbkey=mRNA;gene=LOC409624;product=acetate-CoA ligase 1;transcript_id=XM_006562492.1
Group7.16	NCBI	CDS	107587	107832	.	+	2	ID=CDS5;Parent=mRNA5;Name=XP_006562555.1;Dbxref=GeneID:409624,Genbank:XP_006562555.1,BEEBASE:GB46290;gbkey=CDS;gene=LOC409624;product=acetyl-coenzyme A synthetase-like;protein_id=XP_006562555.1
Group7.16	NCBI	intron	107833	108074	.	+	.	Parent=mRNA5
Group7.16	NCBI	CDS	108075	108271	.	+	2	ID=CDS5;Parent=mRNA5;Name=XP_006562555.1;Dbxref=GeneID:409624,Genbank:XP_006562555.1,BEEBASE:GB46290;gbkey=CDS;gene=LOC409624;product=acetyl-coenzyme A synthetase-like;protein_id=XP_006562555.1
Group7.16	NCBI	exon	108075	108280	.	+	.	Parent=mRNA5;Dbxref=GeneID:409624,Genbank:XM_006562492.1,BEEBASE:GB46290;gbkey=mRNA;gene=LOC409624;product=acetate-CoA ligase 1;transcript_id=XM_006562492.1
Group7.16	NCBI	stop_codon	108269	108271	.	+	.	Parent=mRNA5
Group7.16	NCBI	three_prime_UTR	108272	108280	.	+	.	Parent=mRNA5
###
 |
     |  CDS structure comparison
     |    10 reference CDS segments
     |        8 match prediction
     |        2 don't match prediction
     |    9 prediction CDS segments
     |        8 match reference
     |        1 don't match reference
     |    Sensitivity:                   0.800     
     |    Specificity:                   0.889     
     |    F1 Score:                      0.842     
     |    Annotation edit distance:      0.156     
     |
     |  Exon structure comparison
     |    10 reference exons
     |        7 match prediction
     |        3 don't match prediction
     |    9 prediction exons
     |        7 match reference
     |        2 don't match reference
     |    Sensitivity:                   0.700     
     |    Specificity:                   0.778     
     |    F1 Score:                      0.737     
     |    Annotation edit distance:      0.261     
     |
     |  UTR structure comparison
     |    1 reference UTR segments
     |        0 match prediction
     |        1 don't match prediction
     |    2 prediction UTR segments
     |        0 match reference
     |        2 don't match reference
     |    Sensitivity:                   0.000     
     |    Specificity:                   0.000     
     |    F1 Score:                      --        
     |    Annotation edit distance:      1.000     
     |
     |  Nucleotide-level comparison      CDS        UTRs       Overall   
     |    Matching coefficient:          0.991      0.928      0.302
     |    Correlation coefficient:       0.935      -0.003     --        
     |    Sensitivity:                   0.884      0.006      --        
     |    Specificity:                   1.000      0.057      --        
     |    F1 Score:                      0.939      0.011      --        
     |    Annotation edit distance:      0.058      0.968      --        
     |
     |
     |--------------------------
     |----- End comparison -----
     |--------------------------

|-------------------------------------------------
|---- Locus: seqid=Group7.16 range=110154-117415
|-------------------------------------------------
|
|  reference genes:
|    gene7
|
|  prediction genes:
|    gene6
|
|----------
     |
     |--------------------------
     |---- Begin comparison ----
     |--------------------------
     |
     |  reference transcripts:
     |    mRNA7
     |  prediction transcripts:
     |    mRNA7
     |
     | reference GFF3:
##gff-version 3
Group7.16	OGS	mRNA	110657	116915	1	+	.	ID=mRNA7
Group7.16	OGS	five_prime_UTR	110657	110831	1	+	.	Parent=mRNA7
Group7.16	OGS	exon	110657	110891	1	+	.	Parent=mRNA7
Group7.16	OGS	start_codon	110832	110834	.	+	.	Parent=mRNA7
Group7.16	OGS	CDS	110832	110891	.	+	0	ID=CDS7;Parent=mRNA7
Group7.16	OGS	intron	110892	111894	.	+	.	Parent=mRNA7
Group7.16	OGS	CDS	111895	112028	.	+	0	ID=CDS7;Parent=mRNA7
Group7.16	OGS	exon	111895	112028	1	+	.	Parent=mRNA7
Group7.16	OGS	intron	112029	114290	.	+	.	Parent=mRNA7
Group7.16	OGS	CDS	114291	114550	.	+	1	ID=CDS7;Parent=mRNA7
Group7.16	OGS	exon	114291	114550	1	+	.	Parent=mRNA7
Group7.16	OGS	intron	114551	114742	.	+	.	Parent=mRNA7
Group7.16	OGS	CDS	114743	114848	.	+	2	ID=CDS7;Parent=mRNA7
Group7.16	OGS	exon	114743	114848	1	+	.	Parent=mRNA7
Group7.16	OGS	intron	114849	114936	.	+	.	Parent=mRNA7
Group7.16	OGS	CDS	114937	115088	.	+	1	ID=CDS7;Parent=mRNA7
Group7.16	OGS	exon	114937	115088	1	+	.	Parent=mRNA7
Group7.16	OGS	intron	115089	116328	.	+	.	Parent=mRNA7
Group7.16	OGS	CDS	116329	116435	.	+	2	ID=CDS7;Parent=mRNA7
Group7.16	OGS	exon	116329	116915	1	+	.	Parent=mRNA7
Group7.16	OGS	stop_codon	116433	116435	.	+	.	Parent=mRNA7
Group7.16	OGS	three_prime_UTR	116436	116915	1	+	.	Parent=mRNA7
###
     | prediction GFF3:
##gff-version 3
Group7.16	NCBI	mRNA	110654	116906	.	+	.	ID=mRNA7;Name=XM_393191.5;Dbxref=GeneID:409693,Genbank:XM_393191.5,BEEBASE:GB46291;gbkey=mRNA;gene=LOC409693;product=inositol-1-%28or 4-%29monophosphatase;transcript_id=XM_393191.5
Group7.16	NCBI	five_prime_UTR	110654	110831	.	+	.	Parent=mRNA7
Group7.16	NCBI	exon	110654	110891	.	+	.	Parent=mRNA7;Dbxref=GeneID:409693,Genbank:XM_393191.5,BEEBASE:GB46291;gbkey=mRNA;gene=LOC409693;product=inositol-1-%28or 4-%29monophosphatase;transcript_id=XM_393191.5
Group7.16	NCBI	start_codon	110832	110834	.	+	.	Parent=mRNA7
Group7.16	NCBI	CDS	110832	110891	.	+	0	ID=CDS7;Parent=mRNA7;Name=XP_393191.2;Dbxref=GeneID:409693,Genbank:XP_393191.2,BEEBASE:GB46291;gbkey=CDS;gene=LOC409693;product=inositol monophosphatase 1-like;protein_id=XP_393191.2
Group7.16	NCBI	intron	110892	111894	.	+	.	Parent=mRNA7
Group7.16	NCBI	exon	111895	112028	.	+	.	Parent=mRNA7;Dbxref=GeneID:409693,Genbank:XM_393191.5,BEEBASE:GB46291;gbkey=mRNA;gene=LOC409693;product=inositol-1-%28or 4-%29monophosphatase;transcript_id=XM_393191.5
Group7.16	NCBI	CDS	111895	112028	.	+	0	ID=CDS7;Parent=mRNA7;Name=XP_393191.2;Dbxref=GeneID:409693,Genbank:XP_393191.2,BEEBASE:GB46291;gbkey=CDS;gene=LOC409693;product=inositol monophosphatase 1-like;protein_id=XP_393191.2
Group7.16	NCBI	intron	112029	114290	.	+	.	Parent=mRNA7
Group7.16	NCBI	exon	114291	114550	.	+	.	Parent=mRNA7;Dbxref=GeneID:409693,Genbank:XM_393191.5,BEEBASE:GB46291;gbkey=mRNA;gene=LOC409693;product=inositol-1-%28or 4-%29monophosphatase;transcript_id=XM_393191.5
Group7.16	NCBI	CDS	114291	114550	.	+	1	ID=CDS7;Parent=mRNA7;Name=XP_393191.2;Dbxref=GeneID:409693,Genbank:XP_393191.2,BEEBASE:GB46291;gbkey=CDS;gene=LOC409693;product=inositol monophosphatase 1-like;protein_id=XP_393191.2
Group7.16	NCBI	intron	114551	114742	.	+	.	Parent=mRNA7
Group7.16	NCBI	exon	114743	114848	.	+	.	Parent=mRNA7;Dbxref=GeneID:409693,Genbank:XM_393191.5,BEEBASE:GB46291;gbkey=mRNA;gene=LOC409693;product=inositol-1-%28or 4-%29monophosphatase;transcript_id=XM_393191.5
Group7.16	NCBI	CDS	114743	114848	.	+	2	ID=CDS7;Parent=mRNA7;Name=XP_393191.2;Dbxref=GeneID:409693,Genbank:XP_393191.2,BEEBASE:GB46291;gbkey=CDS;gene=LOC409693;product=inositol monophosphatase 1-like;protein_id=XP_393191.2
Group7.16	NCBI	intron	114849	114936	.	+	.	Parent=mRNA7
Group7.16	NCBI	exon	114937	115088	.	+	.	Parent=mRNA7;Dbxref=GeneID:409693,Genbank:XM_393191.5,BEEBASE:GB46291;gbkey=mRNA;gene=LOC409693;product=inositol-1-%28or 4-%29monophosphatase;transcript_id=XM_393191.5
Group7.16	NCBI	CDS	114937	115088	.	+	1	ID=CDS7;Parent=mRNA7;Name=XP_393191.2;Dbxref=GeneID:409693,Genbank:XP_393191.2,BEEBASE:GB46291;gbkey=CDS;gene=LOC409693;product=inositol monophosphatase 1-like;protein_id=XP_393191.2
Group7.16	NCBI	intron	115089	116328	.	+	.	Parent=mRNA7
Group7.16	NCBI	CDS	116329	116435	.	+	2	ID=CDS7;Parent=mRNA7;Name=XP_393191.2;Dbxref=GeneID:409693,Genbank:XP_393191.2,BEEBASE:GB46291;gbkey=CDS;gene=LOC409693;product=inositol monophosphatase 1-like;protein_id=XP_393191.2
Group7.16	NCBI	exon	116329	116906	.	+	.	Parent=mRNA7;Dbxref=GeneID:409693,Genbank:XM_393191.5,BEEBASE:GB46291;gbkey=mRNA;gene=LOC409693;product=inositol-1-%28or 4-%29monophosphatase;transcript_id=XM_393191.5
Group7.16	NCBI	stop_codon	116433	116435	.	+	.	Parent=mRNA7
Group7.16	NCBI	three_prime_UTR	116436	116906	.	+	.	Parent=mRNA7
###
 |
     |  CDS structure comparison
     |    6 reference  CDS segments
     |    6 prediction CDS segments
     |    CDS structures match perfectly!
     |
     |  Exon structure comparison
     |    6 reference exons
     |        4 match prediction
     |        2 don't match prediction
     |    6 prediction exons
     |        4 match reference
     |        2 don't match reference
     |    Sensitivity:                   0.667     
     |    Specificity:                   0.667     
     |    F1 Score:                      0.667     
     |    Annotation edit distance:      0.333     
     |
     |  UTR structure comparison
     |    2 reference UTR segments
     |        0 match prediction
     |        2 don't match prediction
     |    2 prediction UTR segments
     |        0 match reference
     |        2 don't match reference
     |    Sensitivity:                   0.000     
     |    Specificity:                   0.000     
     |    F1 Score:                      --        
     |    Annotation edit distance:      1.000     
     |
     |  Nucleotide-level comparison      CDS        UTRs       Overall   
     |    Matching coefficient:          1.000      0.998      0.998
     |    Correlation coefficient:       1.000      0.990      --        
     |    Sensitivity:                   1.000      0.986      --        
     |    Specificity:                   1.000      0.995      --        
     |    F1 Score:                      1.000      0.991      --        
     |    Annotation edit distance:      0.000      0.009      --        
     |
     |
     |--------------------------
     |----- End comparison -----
     |--------------------------

|-------------------------------------------------
|---- Locus: seqid=Group7.16 range=116729-120307
|-------------------------------------------------
|
|  reference genes:
|    gene9
|    gene8
|
|  prediction genes:
|    gene7
|
|----------
     |
     |--------------------------
     |---- Begin comparison ----
     |--------------------------
     |
     |  reference transcripts:
     |    mRNA9
     |  prediction transcripts:
     |    mRNA8
     |
     | reference GFF3:
##gff-version 3
Group7.16	OGS	mRNA	119475	119769	1	-	.	ID=mRNA9
Group7.16	OGS	stop_codon	119475	119477	.	-	.	Parent=mRNA9
Group7.16	OGS	CDS	119475	119675	.	-	0	ID=CDS9;Parent=mRNA9
Group7.16	OGS	exon	119475	119675	.	-	.	Parent=mRNA9
Group7.16	OGS	intron	119676	119754	.	-	.	Parent=mRNA9
Group7.16	OGS	CDS	119755	119769	.	-	0	ID=CDS9;Parent=mRNA9
Group7.16	OGS	exon	119755	119769	.	-	.	Parent=mRNA9
Group7.16	OGS	start_codon	119767	119769	.	-	.	Parent=mRNA9
###
     | prediction GFF3:
##gff-version 3
Group7.16	NCBI	mRNA	118880	119778	.	-	.	ID=mRNA8;Name=XM_006562490.1;Dbxref=GeneID:102655672,Genbank:XM_006562490.1;gbkey=mRNA;gene=LOC102655672;product=serine%2Fthreonine-protein kinase PRP4 homolog;transcript_id=XM_006562490.1
Group7.16	NCBI	three_prime_UTR	118880	119474	.	-	.	Parent=mRNA8
Group7.16	NCBI	exon	118880	119778	.	-	.	Parent=mRNA8;Dbxref=GeneID:102655672,Genbank:XM_006562490.1;gbkey=mRNA;gene=LOC102655672;product=serine%2Fthreonine-protein kinase PRP4 homolog;transcript_id=XM_006562490.1
Group7.16	NCBI	stop_codon	119475	119477	.	-	.	Parent=mRNA8
Group7.16	NCBI	CDS	119475	119660	.	-	0	Parent=mRNA8;Name=XP_006562553.1;Dbxref=GeneID:102655672,Genbank:XP_006562553.1;gbkey=CDS;gene=LOC102655672;product=serine%2Fthreonine-protein kinase PRP4 homolog;protein_id=XP_006562553.1
Group7.16	NCBI	start_codon	119658	119660	.	-	.	Parent=mRNA8
Group7.16	NCBI	five_prime_UTR	119661	119778	.	-	.	Parent=mRNA8
###
 |
     |  CDS structure comparison
     |    2 reference CDS segments
     |        0 match prediction
     |        2 don't match prediction
     |    1 prediction CDS segments
     |        0 match reference
     |        1 don't match reference
     |    Sensitivity:                   0.000     
     |    Specificity:                   0.000     
     |    F1 Score:                      --        
     |    Annotation edit distance:      1.000     
     |
     |  Exon structure comparison
     |    2 reference exons
     |        0 match prediction
     |        2 don't match prediction
     |    1 prediction exons
     |        0 match reference
     |        1 don't match reference
     |    Sensitivity:                   0.000     
     |    Specificity:                   0.000     
     |    F1 Score:                      --        
     |    Annotation edit distance:      1.000     
     |
     |  UTR structure comparison
     |    0 reference UTR segments
     |        0 match prediction
     |        0 don't match prediction
     |    2 prediction UTR segments
     |        0 match reference
     |        2 don't match reference
     |    Sensitivity:                   --        
     |    Specificity:                   0.000     
     |    F1 Score:                      --        
     |    Annotation edit distance:      --        
     |
     |  Nucleotide-level comparison      CDS        UTRs       Overall   
     |    Matching coefficient:          0.992      0.801      0.801
     |    Correlation coefficient:       0.924      --         --        
     |    Sensitivity:                   0.861      --         --        
     |    Specificity:                   1.000      0.000      --        
     |    F1 Score:                      0.925      --         --        
     |    Annotation edit distance:      0.069      --         --        
     |
     |
     |--------------------------
     |----- End comparison -----
     |--------------------------
     |
     |--- Unmatched reference transcripts ---
     |---------------------------------------
     |
     |    mRNA8
     |

|-------------------------------------------------
|---- Locus: seqid=Group7.16 range=120308-124614
|-------------------------------------------------
|
|  reference genes:
|    gene10
|
|  prediction genes:
|    gene8
|
|----------
     |
     |--------------------------
     |---- Begin comparison ----
     |--------------------------
     |
     |  reference transcripts:
     |    mRNA10
     |  prediction transcripts:
     |    mRNA9
     |
     | reference GFF3:
##gff-version 3
Group7.16	OGS	mRNA	120837	124094	1	-	.	ID=mRNA10
Group7.16	OGS	three_prime_UTR	120837	120883	1	-	.	Parent=mRNA10
Group7.16	OGS	exon	120837	120973	1	-	.	Parent=mRNA10
Group7.16	OGS	stop_codon	120884	120886	.	-	.	Parent=mRNA10
Group7.16	OGS	CDS	120884	120973	.	-	0	ID=CDS10;Parent=mRNA10
Group7.16	OGS	intron	120974	121085	.	-	.	Parent=mRNA10
Group7.16	OGS	CDS	121086	121433	.	-	0	ID=CDS10;Parent=mRNA10
Group7.16	OGS	exon	121086	121433	1	-	.	Parent=mRNA10
Group7.16	OGS	intron	121434	121527	.	-	.	Parent=mRNA10
Group7.16	OGS	CDS	121528	122287	.	-	1	ID=CDS10;Parent=mRNA10
Group7.16	OGS	exon	121528	122287	1	-	.	Parent=mRNA10
Group7.16	OGS	intron	122288	122345	.	-	.	Parent=mRNA10
Group7.16	OGS	CDS	122346	122827	.	-	0	ID=CDS10;Parent=mRNA10
Group7.16	OGS	exon	122346	122827	1	-	.	Parent=mRNA10
Group7.16	OGS	intron	122828	122909	.	-	.	Parent=mRNA10
Group7.16	OGS	CDS	122910	123156	.	-	1	ID=CDS10;Parent=mRNA10
Group7.16	OGS	exon	122910	123156	1	-	.	Parent=mRNA10
Group7.16	OGS	intron	123157	123222	.	-	.	Parent=mRNA10
Group7.16	OGS	CDS	123223	123393	.	-	1	ID=CDS10;Parent=mRNA10
Group7.16	OGS	exon	123223	123393	1	-	.	Parent=mRNA10
Group7.16	OGS	intron	123394	123946	.	-	.	Parent=mRNA10
Group7.16	OGS	CDS	123947	123951	.	-	0	ID=CDS10;Parent=mRNA10
Group7.16	OGS	exon	123947	124094	1	-	.	Parent=mRNA10
Group7.16	OGS	start_codon	123949	123951	.	-	.	Parent=mRNA10
Group7.16	OGS	five_prime_UTR	123952	124094	1	-	.	Parent=mRNA10
###
     | prediction GFF3:
##gff-version 3
Group7.16	NCBI	mRNA	120866	124108	.	-	.	ID=mRNA9;Name=XM_006562488.1;Dbxref=GeneID:725406,Genbank:XM_006562488.1,BEEBASE:GB46282;gbkey=mRNA;gene=LOC725406;product=uncharacterized LOC725406%2C transcript variant X1;transcript_id=XM_006562488.1
Group7.16	NCBI	three_prime_UTR	120866	120883	.	-	.	Parent=mRNA9
Group7.16	NCBI	exon	120866	120973	.	-	.	Parent=mRNA9;Dbxref=GeneID:725406,Genbank:XM_006562488.1,BEEBASE:GB46282;gbkey=mRNA;gene=LOC725406;product=uncharacterized LOC725406%2C transcript variant X1;transcript_id=XM_006562488.1
Group7.16	NCBI	stop_codon	120884	120886	.	-	.	Parent=mRNA9
Group7.16	NCBI	CDS	120884	120973	.	-	0	ID=CDS8;Parent=mRNA9;Name=XP_006562551.1;Dbxref=GeneID:725406,Genbank:XP_006562551.1,BEEBASE:GB46282;gbkey=CDS;gene=LOC725406;product=serine%2Fthreonine-protein kinase PRP4 homolog isoform X1;protein_id=XP_006562551.1
Group7.16	NCBI	intron	120974	121085	.	-	.	Parent=mRNA9
Group7.16	NCBI	exon	121086	121433	.	-	.	Parent=mRNA9;Dbxref=GeneID:725406,Genbank:XM_006562488.1,BEEBASE:GB46282;gbkey=mRNA;gene=LOC725406;product=uncharacterized LOC725406%2C transcript variant X1;transcript_id=XM_006562488.1
Group7.16	NCBI	CDS	121086	121433	.	-	0	ID=CDS8;Parent=mRNA9;Name=XP_006562551.1;Dbxref=GeneID:725406,Genbank:XP_006562551.1,BEEBASE:GB46282;gbkey=CDS;gene=LOC725406;product=serine%2Fthreonine-protein kinase PRP4 homolog isoform X1;protein_id=XP_006562551.1
Group7.16	NCBI	intron	121434	121527	.	-	.	Parent=mRNA9
Group7.16	NCBI	exon	121528	122287	.	-	.	Parent=mRNA9;Dbxref=GeneID:725406,Genbank:XM_006562488.1,BEEBASE:GB46282;gbkey=mRNA;gene=LOC725406;product=uncharacterized LOC725406%2C transcript variant X1;transcript_id=XM_006562488.1
Group7.16	NCBI	CDS	121528	122287	.	-	1	ID=CDS8;Parent=mRNA9;Name=XP_006562551.1;Dbxref=GeneID:725406,Genbank:XP_006562551.1,BEEBASE:GB46282;gbkey=CDS;gene=LOC725406;product=serine%2Fthreonine-protein kinase PRP4 homolog isoform X1;protein_id=XP_006562551.1
Group7.16	NCBI	intron	122288	122345	.	-	.	Parent=mRNA9
Group7.16	NCBI	exon	122346	122827	.	-	.	Parent=mRNA9;Dbxref=GeneID:725406,Genbank:XM_006562488.1,BEEBASE:GB46282;gbkey=mRNA;gene=LOC725406;product=uncharacterized LOC725406%2C transcript variant X1;transcript_id=XM_006562488.1
Group7.16	NCBI	CDS	122346	122827	.	-	0	ID=CDS8;Parent=mRNA9;Name=XP_006562551.1;Dbxref=GeneID:725406,Genbank:XP_006562551.1,BEEBASE:GB46282;gbkey=CDS;gene=LOC725406;product=serine%2Fthreonine-protein kinase PRP4 homolog isoform X1;protein_id=XP_006562551.1
Group7.16	NCBI	intron	122828	122909	.	-	.	Parent=mRNA9
Group7.16	NCBI	exon	122910	123156	.	-	.	Parent=mRNA9;Dbxref=GeneID:725406,Genbank:XM_006562488.1,BEEBASE:GB46282;gbkey=mRNA;gene=LOC725406;product=uncharacterized LOC725406%2C transcript variant X1;transcript_id=XM_006562488.1
Group7.16	NCBI	CDS	122910	123156	.	-	1	ID=CDS8;Parent=mRNA9;Name=XP_006562551.1;Dbxref=GeneID:725406,Genbank:XP_006562551.1,BEEBASE:GB46282;gbkey=CDS;gene=LOC725406;product=serine%2Fthreonine-protein kinase PRP4 homolog isoform X1;protein_id=XP_006562551.1
Group7.16	NCBI	intron	123157	123222	.	-	.	Parent=mRNA9
Group7.16	NCBI	exon	123223	123393	.	-	.	Parent=mRNA9;Dbxref=GeneID:725406,Genbank:XM_006562488.1,BEEBASE:GB46282;gbkey=mRNA;gene=LOC725406;product=uncharacterized LOC725406%2C transcript variant X1;transcript_id=XM_006562488.1
Group7.16	NCBI	CDS	123223	123393	.	-	1	ID=CDS8;Parent=mRNA9;Name=XP_006562551.1;Dbxref=GeneID:725406,Genbank:XP_006562551.1,BEEBASE:GB46282;gbkey=CDS;gene=LOC725406;product=serine%2Fthreonine-protein kinase PRP4 homolog isoform X1;protein_id=XP_006562551.1
Group7.16	NCBI	intron	123394	123946	.	-	.	Parent=mRNA9
Group7.16	NCBI	CDS	123947	123951	.	-	0	ID=CDS8;Parent=mRNA9;Name=XP_006562551.1;Dbxref=GeneID:725406,Genbank:XP_006562551.1,BEEBASE:GB46282;gbkey=CDS;gene=LOC725406;product=serine%2Fthreonine-protein kinase PRP4 homolog isoform X1;protein_id=XP_006562551.1
Group7.16	NCBI	exon	123947	124108	.	-	.	Parent=mRNA9;Dbxref=GeneID:725406,Genbank:XM_006562488.1,BEEBASE:GB46282;gbkey=mRNA;gene=LOC725406;product=uncharacterized LOC725406%2C transcript variant X1;transcript_id=XM_006562488.1
Group7.16	NCBI	start_codon	123949	123951	.	-	.	Parent=mRNA9
Group7.16	NCBI	five_prime_UTR	123952	124108	.	-	.	Parent=mRNA9
###
 |
     |  CDS structure comparison
     |    7 reference  CDS segments
     |    7 prediction CDS segments
     |    CDS structures match perfectly!
     |
     |  Exon structure comparison
     |    7 reference exons
     |        5 match prediction
     |        2 don't match prediction
     |    7 prediction exons
     |        5 match reference
     |        2 don't match reference
     |    Sensitivity:                   0.714     
     |    Specificity:                   0.714     
     |    F1 Score:                      0.714     
     |    Annotation edit distance:      0.286     
     |
     |  UTR structure comparison
     |    2 reference UTR segments
     |        0 match prediction
     |        2 don't match prediction
     |    2 prediction UTR segments
     |        0 match reference
     |        2 don't match reference
     |    Sensitivity:                   0.000     
     |    Specificity:                   0.000     
     |    F1 Score:                      --        
     |    Annotation edit distance:      1.000     
     |
     |  Nucleotide-level comparison      CDS        UTRs       Overall   
     |    Matching coefficient:          1.000      0.990      0.990
     |    Correlation coefficient:       1.000      0.878      --        
     |    Sensitivity:                   1.000      0.847      --        
     |    Specificity:                   1.000      0.920      --        
     |    F1 Score:                      1.000      0.882      --        
     |    Annotation edit distance:      0.000      0.116      --        
     |
     |
     |--------------------------
     |----- End comparison -----
     |--------------------------
     |
     |--- Unmatched prediction transcripts ---
     |----------------------------------------
     |
     |    mRNA10
     |

============================================================
========== ParsEval Summary
============================================================

Reference annotations:  OGS
Prediction annotations: NCBI
Executing command:      bin/parseval --refrlabel=OGS --predlabel=NCBI --delta=500 data/gff3/amel-ogs-g716.gff3 data/gff3/amel-ncbi-g716.gff3 

  Sequences compared
    Group7.16

  Gene loci................................8
    shared.................................7
    unique to reference....................1
    unique to prediction...................0

  Reference annotations
    genes..................................10
      average per locus....................1.250
    transcripts............................10
      average per locus....................1.250
      average per gene.....................1.000

  Prediction annotations
    genes..................................8
      average per locus....................1.000
    transcripts............................10
      average per locus....................1.250
      average per gene.....................1.250

  Total comparisons........................8
    perfect matches........................0 (0.0%)
    perfect matches with mislabeled UTRs...0 (0.0%)
    CDS structure matches..................4 (50.0%)
      avg. length..........................9698.25 bp
      avg. # refr exons....................5.75
      avg. # pred exons....................6.00
      avg. refr CDS length.................455.25 aa
      avg. pred CDS length.................455.25 aa
    exon structure matches.................0 (0.0%)
    UTR structure matches..................0 (0.0%)
    non-matches............................4 (50.0%)
      avg. length..........................14745.00 bp
      avg. # refr exons....................6.50
      avg. # pred exons....................6.25
      avg. refr CDS length.................398.25 aa
      avg. pred CDS length.................391.50 aa

  CDS structure comparison
    reference CDS segments.................49
      match prediction.....................44 (89.8%)
      don't match prediction...............5 (10.2%)
    prediction CDS segments................48
      match reference......................44 (91.7%)
      don't match reference................4 (8.3%)
    Sensitivity............................0.898
    Specificity............................0.917
    F1 Score...............................0.907
    Annotation edit distance...............0.093

  Exon structure comparison
    reference exons........................49
      match prediction.....................33 (67.3%)
      don't match prediction...............16 (32.7%)
    prediction exons.......................49
      match reference......................33 (67.3%)
      don't match reference................16 (32.7%)
    Sensitivity............................0.673
    Specificity............................0.673
    F1 Score...............................0.673
    Annotation edit distance...............0.327

  UTR structure comparison
    reference UTR segments.................10
      match prediction.....................0 (0.0%)
      don't match prediction...............10 (100.0%)
    prediction UTR segments................16
      match reference......................0 (0.0%)
      don't match reference................16 (100.0%)
    Sensitivity............................0.000
    Specificity............................0.000
    F1 Score...............................--
    Annotation edit distance...............1.000

  Nucleotide-level comparison      CDS          UTRs         Overall   
    Matching coefficient:          0.996        0.967        0.819
    Correlation coefficient:       0.978        0.431        --        
    Sensitivity:                   0.976        0.371        --        
    Specificity:                   0.984        0.540        --        
    F1 Score:                      0.980        0.440        --        
    Annotation edit distance:      0.020        0.544        --        
