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Package: bcbio
Binary: python3-bcbio, bcbio
Version: 1.2.5-1
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Steffen Moeller <moeller@debian.org>
Build-Depends: debhelper-compat (= 13), dh-python, python3-all, python3-setuptools, python3-gffutils, python3-mock, python3-pandas, python3-pybedtools, python3-pysam, python3-pyvcf, python3-toolz, python3-tornado, python3-yaml, python3-scipy, python3-psutil, python3-joblib, atropos <!nocheck>, bcftools <!nocheck>, bedtools <!nocheck>, biobambam2 <!nocheck>, bowtie2 <!nocheck>, cnvkit <!nocheck>, fastqc <!nocheck>, freebayes <!nocheck>, gffread <!nocheck>, grabix <!nocheck>, gsort <!nocheck>, hisat2 <!nocheck>, hts-nim-tools <!nocheck>, libfreetype6 <!nocheck>, lumpy-sv <!nocheck>, mosdepth <!nocheck>, multiqc <!nocheck>, perl <!nocheck>, libpicard-java <!nocheck>, libvcflib-tools <!nocheck>, picard-tools <!nocheck>, python3-biopython <!nocheck>, python3-cyvcf2 <!nocheck>, python3-geneimpacts <!nocheck>, python3-logbook <!nocheck>, python3-nose <!nocheck>, python3-requests <!nocheck>, python3-pytest <!nocheck>, python3-pytest-mock <!nocheck>, python3-seqcluster <!nocheck>, pythonpy <!nocheck>, rapmap <!nocheck>, rna-star <!nocheck>, r-other-wasabi <!nocheck>, r-bioc-htsfilter <!nocheck>, r-bioc-degreport <!nocheck>, r-bioc-purecn <!nocheck>, r-cran-tidyverse <!nocheck>, r-bioc-titancna <!nocheck>, r-bioc-tximport <!nocheck>, salmon <!nocheck>, samblaster <!nocheck>, samtools <!nocheck>, seqan-apps <!nocheck>, seqtk <!nocheck>, subread <!nocheck>, tabix <!nocheck>, tophat-recondition <!nocheck>, umis <!nocheck>, vcfanno <!nocheck>, vt <!nocheck>, wham-align <!nocheck>, xonsh <!nocheck>, python3-sphinx
Architecture: all
Standards-Version: 4.5.0
Format: 3.0 (quilt)
Files:
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Vcs-Browser: https://salsa.debian.org/med-team/bcbio
Vcs-Git: https://salsa.debian.org/med-team/bcbio.git
Checksums-Sha256:
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 bc16e3e93fc07a695203f32afd39b87639e580991f6c5d5f16a86d7fd12b6caa 14528 bcbio_1.2.5-1.debian.tar.xz
Homepage: https://github.com/bcbio/bcbio-nextgen
Package-List: 
 bcbio deb contrib/science optional arch=all
 python3-bcbio deb contrib/python optional arch=all
Testsuite: autopkgtest-pkg-python
Directory: pool/contrib/b/bcbio
Priority: extra
Section: contrib/misc

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